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contig_metadata

3 rows where bioproject = "PRJNA551951" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA551951 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5624391 5624391 PRJNA551951_S_NODE_16445_length_159_cov_1.354839_g16327_i0 PRJNA551951 16445 159 1.354839 2.15419401 Methanobacterium formicicum 2162 Archaea Archaea 272 9.28e-69   NTclustered gi|683509033|emb|LN515531.1| 2162 g16327 i0 97.484 4 159 4 100 0 1 159 1558879 1558721 Methanobacterium formicicum genome assembly, chromosome: chrI blastn 636 272 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium formicicum
31626769 31626769 PRJNA551951_S_NODE_13296_length_187_cov_3.118421_g13178_i0 PRJNA551951 13296 187 3.118421 5.83144727 Candidatus Bathyarchaeum tardum 3042151 Archaea Archaea 41.6 0.0444   NR WGM88472.1 3042151 g13178 i0 35.7 0.898395721925134 56 36 89.8 0 12 179 191 246 WGM88472.1 MAG: oligosaccharide flippase family protein [Candidatus Bathyarchaeum tardum] diamond 168 41.6 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia Candidatus Bathyarchaeales Candidatus Bathyarchaeaceae Candidatus Bathyarchaeum Candidatus Bathyarchaeum tardum
31784832 31784832 PRJNA551951_S_NODE_6277_length_338_cov_211.930693_g6159_i0 PRJNA551951 6277 338 211.930693 716.32574234 Thermoproteota archaeon 2056631 Archaea Archaea 147 2.4699999999999993e-40   NR MEM3368576.1 2056631 g6159 i0 82.8 0.878698224852071 99 17 87.9 0 338 42 140 238 MEM3368576.1 hypothetical protein [Thermoproteota archaeon] diamond 297 147 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;