RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA551951" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA551951 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27867778 27867778 PRJNA551951_S_NODE_10305_length_231_cov_2.005102_g10187_i0 PRJNA551951 10305 231 2.005102 4.63178562 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 119 2.11e-32   NR CAF5151067.1 2762511 g10187 i0 82.6 2.68831168831169 69 12 89.6 0 231 25 67 135 CAF5151067.1 unnamed protein product, partial [Rotaria sp. Silwood1] diamond 621 119 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
32670303 32670303 PRJNA551951_S_NODE_7880_length_285_cov_10.668000_g7762_i0 PRJNA551951 7880 285 10.668 30.4038 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 70.9 7.03e-13   NR CAF4675100.1 392030 g7762 i0 88.6 1.47368421052632 35 4 36.8 0 260 156 133 167 CAF4675100.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 420 70.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;