RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA551951", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA551951 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18372263 18372263 PRJNA551951_S_NODE_13495_length_185_cov_1.833333_g13377_i0 PRJNA551951 13495 185 1.833333 3.39166605 Octopus sinensis 2607531 Mollusca Mollusca 73.1 1.21e-8   NTclustered gi|1914651934|ref|XR_005004171.1| 2607531 g13377 i0 86.364 0.713513513513514 66 9 36 0 1 66 1444 1379 PREDICTED: Octopus sinensis zinc finger protein 239-like (LOC115225890), transcript variant X3, misc_RNA blastn 132 73.1 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
30299837 30299837 PRJNA551951_S_NODE_4072_length_449_cov_40.342995_g3957_i0 PRJNA551951 4072 449 40.342995 181.14004755 Acanthosepion pharaonis 158019 Mollusca Mollusca 45.1 0.0369   NR CAE1295632.1 158019 g3957 i0 42.6 0.674832962138085 101 50 65.5 4 3 296 16 111 CAE1295632.1 unnamed protein product [Acanthosepion pharaonis] diamond 303 45.1 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion pharaonis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;