RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA550047" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA550047 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29762112 29762112 PRJNA550047_P_NODE_519091_length_224_cov_7.344371_g517118_i0 PRJNA550047 519091 224 7.344371 16.45139104 Thermoplasmata archaeon 1906666 Archaea Archaea 85.5 6.44e-19   NR UCH89826.1 1906666 g517118 i0 48.6 1.98214285714286 74 38 99.1 0 3 224 48 121 UCH89826.1 MAG: dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Thermoplasmata archaeon] diamond 444 85.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31626615 31626615 PRJNA550047_P_NODE_321916_length_294_cov_6.520362_g319946_i0 PRJNA550047 321916 294 6.520362 19.16986428 Thermoplasmatales archaeon 2268204 Archaea Archaea 55.8 1.5e-6   NR MEM4379163.1 2268204 g319946 i0 29.7 1.03061224489796 101 61 93.9 2 293 18 181 280 MEM4379163.1 metallophosphoesterase [Thermoplasmatales archaeon] diamond 303 55.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
32795977 32795977 PRJNA550047_P_NODE_428160_length_254_cov_11.762431_g426188_i0 PRJNA550047 428160 254 11.762431 29.87657474 Poseidonia sp. 2666344 Archaea Archaea 168 2.2199999999999996e-47   NR MCH1536835.1 2666344 g426188 i0 98.8 0.992125984251969 84 1 99.2 0 1 252 99 182 MCH1536835.1 NADH-quinone oxidoreductase subunit M [Poseidonia sp.] diamond 252 168 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae Candidatus Poseidonia Poseidonia sp.
32796051 32796051 PRJNA550047_P_NODE_76660_length_345_cov_11.213235_g74700_i0 PRJNA550047 76660 345 11.213235 38.68566075 Thermoplasmatota archaeon 2806419 Archaea Archaea 94.7 4.88e-20   NR HEX2065762.1 2806419 g74700 i0 90 0.434782608695652 50 5 43.5 0 1 150 170 219 HEX2065762.1 IS701 family transposase [Thermoplasmatota archaeon] diamond 150 94.7 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;