RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA550047" and tax_phylum = "Promethearchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA550047 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26602939 26602939 PRJNA550047_P_NODE_166361_length_345_cov_3.643382_g164401_i0 PRJNA550047 166361 345 3.643382 12.5696679 Promethearchaeota archaeon 2053489 Archaea Archaea 86.3 5.13e-18   NR MCJ7649689.1 2053489 g164401 i0 80 0.434782608695652 50 10 43.5 0 150 1 85 134 MCJ7649689.1 DUF4145 domain-containing protein [Promethearchaeota archaeon] diamond 150 86.3 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
27172784 27172784 PRJNA550047_P_NODE_563282_length_209_cov_10.441176_g561309_i0 PRJNA550047 563282 209 10.441176 21.82205784 Promethearchaeota archaeon 2053489 Archaea Archaea 83.2 1.21e-16   NR TXT66027.1 2053489 g561309 i0 57.8 0.91866028708134 64 27 91.9 0 196 5 139 202 TXT66027.1 MAG: hypothetical protein BAJALOKI3v1_50025 [Promethearchaeota archaeon] diamond 192 83.2 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;