RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA550047" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA550047 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2396590 2396590 PRJNA550047_P_NODE_352942_length_284_cov_3.962085_g350971_i0 PRJNA550047 352942 284 3.962085 11.2523214 Enterovirus 12059 Viruses Viruses 481 2.82e-131   NTclustered gi|1726249435|gb|MN306023.1| 463676 g350971 i0 97.183 26.8591549295775 284 8 100 0 1 284 1451 1734 Rhinovirus C strain SC0323, complete genome blastn 7628 481 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus cerhino
11992761 11992761 PRJNA550047_P_NODE_230170_length_301_cov_6.197368_g228201_i0 PRJNA550047 230170 301 6.197368 18.65407768 Linepithema humile picorna-like virus 1 2259776 Viruses Viruses 274 5.49e-69   NTclustered gi|2306450120|gb|MW314667.1| 2259776 g228201 i0 99.338 2.99003322259136 151 1 99 0 151 301 1782 1932 Linepithema humile picorna-like virus 1 from Italy, complete genome blastn 900 274 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Linepithema humile picorna-like virus 1
13874462 13874462 PRJNA550047_P_NODE_234711_length_301_cov_4.100877_g232742_i0 PRJNA550047 234711 301 4.100877 12.34363977 Enterovirus 12059 Viruses Viruses 276 1.53e-69   NTclustered gi|2917992924|gb|PV178572.1| 185905 g232742 i0 99.342 14.1328903654485 152 1 100 0 1 152 5328 5177 Rhinovirus A34 isolate Rhinovirus A34/human/USA/MA-Broad_BWH-19894/2023 polyprotein gene, partial cds blastn 4254 276 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus alpharhino
15817037 15817037 PRJNA550047_P_NODE_261813_length_300_cov_4.409692_g259844_i0 PRJNA550047 261813 300 4.409692 13.229076 Betacoronavirus pandemicum 3418604 Viruses Viruses 117 9.76e-22   NTclustered gi|2165837707|emb|OV197600.1| 2697049 g259844 i0 93.671 73.2666666666667 79 3 48 2 211 287 29995 29917 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 21980 117 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
18368960 18368960 PRJNA550047_P_NODE_511095_length_227_cov_3.857143_g509122_i0 PRJNA550047 511095 227 3.857143 8.75571461 Enterovirus cerhino 3428504 Viruses Viruses 409 1.04e-109   NTclustered gi|2278964070|dbj|LC720414.1| 1219378 g509122 i0 99.119 53.7753303964758 227 2 100 0 1 227 3447 3673 Rhinovirus C6 HRV_C6_Fukushima_C6_2021 RNA, nearly complete genome blastn 12207 409 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus cerhino
18369006 18369006 PRJNA550047_P_NODE_515695_length_225_cov_10.059211_g513722_i0 PRJNA550047 515695 225 10.059211 22.63322475 Ripigleb virus 3130924 Viruses Viruses 267 6.559999999999999e-67   NTclustered gi|2717321151|gb|PP173226.1| 3130924 g513722 i0 88.393 157.857777777778 224 23 99 2 3 225 8270 8491 MAG: Ripigleb virus isolate KCAP3_k141_261307 genomic sequence blastn 35518 267 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Ripigleb virus
20246951 20246951 PRJNA550047_P_NODE_20756_length_482_cov_3.476773_g18861_i0 PRJNA550047 20756 482 3.476773 16.75804586 Enterovirus 12059 Viruses Viruses 603 1.03e-167   NTclustered gi|1594445172|dbj|LC428166.1| 463676 g18861 i0 99.104 88.7385892116183 335 3 93 0 148 482 344 10 Rhinovirus C 0089-OsakaC-JPN-2016 gene for VP1 protein, partial cds blastn 42772 603 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus cerhino
20919008 20919008 PRJNA550047_P_NODE_47497_length_347_cov_8.343066_g45537_i0 PRJNA550047 47497 347 8.343066 28.95043902 Betacoronavirus pandemicum 3418604 Viruses Viruses 67.6 1.17e-6   NTclustered gi|2560502367|emb|OY629453.1| 2697049 g45537 i0 91.667 11.8328530259366 48 4 14 0 15 62 5949 5902 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4106 67.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23469915 23469915 PRJNA550047_P_NODE_531059_length_220_cov_6.265306_g529086_i0 PRJNA550047 531059 220 6.265306 13.7836732 Enterovirus cerhino 3428504 Viruses Viruses 383 6.08e-102   NTclustered gi|1726249435|gb|MN306023.1| 463676 g529086 i0 98.174 72.0727272727273 219 4 99 0 1 219 4915 4697 Rhinovirus C strain SC0323, complete genome blastn 15856 383 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus cerhino
27204309 27204309 PRJNA550047_P_NODE_41842_length_368_cov_4.237288_g39887_i0 PRJNA550047 41842 368 4.237288 15.59321984 Lysoka partiti-like virus 2169481 Viruses Viruses 101 3.27e-22   NR AWV67005.1 2169481 g39887 i0 79.7 0.480978260869565 59 12 48.1 0 368 192 43 101 AWV67005.1 RdRp, partial [Lysoka partiti-like virus] diamond 177 101 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Lysoka partiti-like virus
28909332 28909332 PRJNA550047_P_NODE_208068_length_318_cov_4.975510_g206100_i0 PRJNA550047 208068 318 4.97551 15.8221218 Lysoka partiti-like virus 2169481 Viruses Viruses 92.4 2.64e-19   NR AWV67005.1 2169481 g206100 i0 50 0.905660377358491 96 42 86.8 3 2 277 367 460 AWV67005.1 RdRp, partial [Lysoka partiti-like virus] diamond 288 92.4 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Lysoka partiti-like virus
29730298 29730298 PRJNA550047_P_NODE_25390_length_448_cov_15.338667_g23477_i0 PRJNA550047 25390 448 15.338667 68.71722816 Lysoka partiti-like virus 2169481 Viruses Viruses 136 2.17e-34   NR AWV67004.1 2169481 g23477 i0 39 1.37276785714286 205 65 97.1 2 11 445 329 533 AWV67004.1 RdRp, partial [Lysoka partiti-like virus] diamond 615 136 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Lysoka partiti-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;