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contig_metadata

27 rows where bioproject = "PRJNA550047" and tax_phylum = "Candidatus Methylomirabilota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 27 ✖

tax_clade 1

bioproject 1

  • PRJNA550047 · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3069465 3069465 PRJNA550047_P_NODE_71923_length_345_cov_12.014706_g69963_i0 PRJNA550047 71923 345 12.014706 41.4507357 Bacillati 1783272 Bacteria Bacteria 90.5 7.64e-19   NR HEX2439706.1 2072417 g69963 i0 86 1.30434782608696 50 7 43.5 0 150 1 1 50 HEX2439706.1 NAD-dependent epimerase/dehydratase family protein [Candidatus Methylomirabilota bacterium] diamond 450 91.3 0.991237677984666 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
5621273 5621273 PRJNA550047_P_NODE_51945_length_345_cov_19.841912_g49985_i0 PRJNA550047 51945 345 19.841912 68.4545964 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 69.3 5.66e-11   NR HEX6082782.1 2072417 g49985 i0 67.4 1.12173913043478 43 14 37.4 0 215 343 37 79 HEX6082782.1 acetate--CoA ligase family protein [Candidatus Methylomirabilota bacterium] diamond 387 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
7500396 7500396 PRJNA550047_P_NODE_588346_length_201_cov_14.640625_g586373_i0 PRJNA550047 588346 201 14.640625 29.42765625 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 115 1.1199999999999999e-28   NR HEX5816964.1 2072417 g586373 i0 90.9 0.985074626865672 66 6 98.5 0 199 2 205 270 HEX5816964.1 M20/M25/M40 family metallo-hydrolase [Candidatus Methylomirabilota bacterium] diamond 198 115 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
8170863 8170863 PRJNA550047_P_NODE_57687_length_345_cov_15.941176_g55727_i0 PRJNA550047 57687 345 15.941176 54.9970572 Bacillati 1783272 Bacteria Bacteria 82.4 2.73e-16   NR HEU4369114.1 2072417 g55727 i0 85.7 1.70434782608696 49 7 42.6 0 148 2 94 142 HEU4369114.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Candidatus Methylomirabilota bacterium] diamond 588 82.4 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
18370426 18370426 PRJNA550047_P_NODE_81995_length_345_cov_10.430147_g80035_i0 PRJNA550047 81995 345 10.430147 35.98400715 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 98.6 3.1e-21   NR HMB36075.1 2072417 g80035 i0 91.8 0.426086956521739 49 4 42.6 0 197 343 434 482 HMB36075.1 hydantoinase/oxoprolinase family protein [Candidatus Methylomirabilota bacterium] diamond 147 98.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
20917759 20917759 PRJNA550047_P_NODE_375617_length_274_cov_16.273632_g373645_i0 PRJNA550047 375617 274 16.273632 44.58975168 Candidatus Methylomirabilis oxygeniifera 671143 Bacteria Bacteria 252 2.31e-62   NTclustered gi|507148395|ref|NR_103198.1| 671143 g373645 i0 83.813 133.547445255474 278 32 99 10 3 274 823 553 Candidatus Methylomirabilis oxyfera 23S ribosomal RNA gene, complete sequence blastn 36592 252 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis oxygeniifera
26825086 26825086 PRJNA550047_P_NODE_393061_length_267_cov_19.036082_g391089_i0 PRJNA550047 393061 267 19.036082 50.82633894 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 95.9 4.24e-23   NR HEY7516991.1 2072417 g391089 i0 60.3 0.820224719101124 73 29 82 0 2 220 63 135 HEY7516991.1 response regulator [Candidatus Methylomirabilota bacterium] diamond 219 95.9 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27046395 27046395 PRJNA550047_P_NODE_132202_length_345_cov_5.897059_g130242_i0 PRJNA550047 132202 345 5.897059 20.34485355 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 70.1 2.73e-11   NR HEV8228294.1 2072417 g130242 i0 64.6 1.6695652173913 48 17 41.7 0 341 198 161 208 HEV8228294.1 ABC transporter substrate-binding protein [Candidatus Methylomirabilota bacterium] diamond 576 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27299355 27299355 PRJNA550047_P_NODE_301023_length_297_cov_7.214286_g299054_i0 PRJNA550047 301023 297 7.214286 21.42642942 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 121 7.01e-30   NR HEX7217253.1 2072417 g299054 i0 67.3 1.97979797979798 98 32 99 0 294 1 176 273 HEX7217253.1 MASE4 domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 588 121 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27787869 27787869 PRJNA550047_P_NODE_184764_length_344_cov_24.357934_g182804_i0 PRJNA550047 184764 344 24.357934 83.79129296 Pseudomonadati 3379134 Bacteria Bacteria 53.5 1.74e-5   NR HEV8309030.1 2072417 g182804 i0 46.9 2.52906976744186 49 26 42.7 0 5 151 268 316 HEV8309030.1 AI-2E family transporter [Candidatus Methylomirabilota bacterium] diamond 870 53.9 0.992578849721707 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28387562 28387562 PRJNA550047_P_NODE_101466_length_345_cov_8.305147_g99506_i0 PRJNA550047 101466 345 8.305147 28.65275715 Bacillati 1783272 Bacteria Bacteria 69.3 3.8e-11   NR HEX9409070.1 2072417 g99506 i0 62 2.54782608695652 50 19 43.5 0 196 345 15 64 HEX9409070.1 DUF6607 family protein [Candidatus Methylomirabilota bacterium] diamond 879 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28513975 28513975 PRJNA550047_P_NODE_401367_length_264_cov_11.890052_g399395_i0 PRJNA550047 401367 264 11.890052 31.38973728 Bacteria 2 Bacteria Bacteria 108 3.56e-25   NR HXG19026.1 2072417 g399395 i0 63.6 1.93181818181818 88 31 100 1 264 1 837 923 HXG19026.1 LamG-like jellyroll fold domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 510 108 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28625771 28625771 PRJNA550047_P_NODE_507427_length_228_cov_6.193548_g505454_i0 PRJNA550047 507427 228 6.193548 14.12128944 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 58.2 2.79e-9   NR HWN93642.1 2072417 g505454 i0 82.9 0.460526315789474 35 6 46.1 0 124 228 1 35 HWN93642.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 105 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28783306 28783306 PRJNA550047_P_NODE_495847_length_232_cov_3.012579_g493874_i0 PRJNA550047 495847 232 3.012579 6.98918328 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 49.7 8.37e-5   NR HTG40476.1 2072417 g493874 i0 49.2 0.788793103448276 61 25 71.1 1 171 7 3 63 HTG40476.1 type II CAAX endopeptidase family protein [Candidatus Methylomirabilota bacterium] diamond 183 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28909494 28909494 PRJNA550047_P_NODE_559788_length_210_cov_12.956204_g557815_i0 PRJNA550047 559788 210 12.956204 27.2080284 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 97.8 3.68e-22   NR MEI8190877.1 2072417 g557815 i0 70.6 3.87142857142857 68 20 97.1 0 2 205 186 253 MEI8190877.1 efflux RND transporter permease subunit [Candidatus Methylomirabilota bacterium] diamond 813 97.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29603991 29603991 PRJNA550047_P_NODE_355410_length_283_cov_3.776190_g353439_i0 PRJNA550047 355410 283 3.77619 10.6866177 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 93.6 1.61e-20   NR HXU87417.1 2072417 g353439 i0 51.1 0.996466431095406 94 46 99.6 0 1 282 170 263 HXU87417.1 sulfotransferase domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 282 93.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29681851 29681851 PRJNA550047_P_NODE_49850_length_345_cov_23.279412_g47890_i0 PRJNA550047 49850 345 23.279412 80.3139714 Pseudomonadati 3379134 Bacteria Bacteria 109 3.76e-25   NR HWS96890.1 2032687 g47890 i0 96 4.33913043478261 50 2 43.5 0 195 344 159 208 HWS96890.1 transketolase [Candidatus Methylomirabilis sp.] diamond 1497 110 0.990909090909091 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.
29776779 29776779 PRJNA550047_P_NODE_248891_length_300_cov_9.810573_g246922_i0 PRJNA550047 248891 300 9.810573 29.431719 Pseudomonadati 3379134 Bacteria Bacteria 105 1.5299999999999999e-24   NR HXA81847.1 2072417 g246922 i0 57.6 3.68 92 27 80 1 2 241 282 373 HXA81847.1 ABC transporter permease [Candidatus Methylomirabilota bacterium] diamond 1104 105 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30236014 30236014 PRJNA550047_P_NODE_308472_length_296_cov_7.569507_g306503_i0 PRJNA550047 308472 296 7.569507 22.40574072 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 43.5 0.0362   NR MBW8005899.1 2072417 g306503 i0 36.8 0.77027027027027 76 39 77 2 68 295 19 85 MBW8005899.1 CCA tRNA nucleotidyltransferase [Candidatus Methylomirabilota bacterium] diamond 228 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31151887 31151887 PRJNA550047_P_NODE_282975_length_298_cov_21.106667_g281006_i0 PRJNA550047 282975 298 21.106667 62.89786766 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 59.3 8.39e-8   NR HEX2442074.1 2072417 g281006 i0 54 0.503355704697987 50 23 50.3 0 2 151 171 220 HEX2442074.1 ABC transporter substrate-binding protein [Candidatus Methylomirabilota bacterium] diamond 150 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31310427 31310427 PRJNA550047_P_NODE_63855_length_345_cov_13.779412_g61895_i0 PRJNA550047 63855 345 13.779412 47.5389714 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 57.4 8.53e-7   NR HME94236.1 2072417 g61895 i0 64.3 1.40869565217391 56 13 42.6 1 199 345 35 90 HME94236.1 AtzE family amidohydrolase [Candidatus Methylomirabilota bacterium] diamond 486 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31658000 31658000 PRJNA550047_P_NODE_152777_length_345_cov_4.547794_g150817_i0 PRJNA550047 152777 345 4.547794 15.6898893 Candidatus Methylomirabilis sp. 2032687 Bacteria Bacteria 65.5 3.44e-10   NR HYB40972.1 2032687 g150817 i0 74.4 3.36521739130435 43 11 37.4 0 200 328 168 210 HYB40972.1 response regulator transcription factor [Candidatus Methylomirabilis sp.] diamond 1161 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.
31894449 31894449 PRJNA550047_P_NODE_543017_length_216_cov_5.958042_g541044_i0 PRJNA550047 543017 216 5.958042 12.86937072 Pseudomonadati 3379134 Bacteria Bacteria 106 6.95e-26   NR HEU5319957.1 2072417 g541044 i0 68.1 7 72 23 100 0 216 1 31 102 HEU5319957.1 exodeoxyribonuclease III [Candidatus Methylomirabilota bacterium] diamond 1512 107 0.990654205607477 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32069438 32069438 PRJNA550047_P_NODE_151818_length_345_cov_4.606618_g149858_i0 PRJNA550047 151818 345 4.606618 15.8928321 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 73.2 2.03e-12   NR HUP55636.1 2072417 g149858 i0 82 1.30434782608696 50 9 43.5 0 343 194 324 373 HUP55636.1 AI-2E family transporter [Candidatus Methylomirabilota bacterium] diamond 450 73.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32322918 32322918 PRJNA550047_P_NODE_100939_length_345_cov_8.349265_g98979_i0 PRJNA550047 100939 345 8.349265 28.80496425 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 117 5.889999999999999e-28   NR MDE2059017.1 2072417 g98979 i0 59 0.91304347826087 105 36 90.4 2 340 29 427 525 MDE2059017.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 315 117 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32701515 32701515 PRJNA550047_P_NODE_121320_length_345_cov_6.672794_g119360_i0 PRJNA550047 121320 345 6.672794 23.0211393 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 70.1 2.71e-11   NR MBI4573769.1 2072417 g119360 i0 60 1.2 50 18 41.7 1 5 148 215 264 MBI4573769.1 AGE family epimerase/isomerase [Candidatus Methylomirabilota bacterium] diamond 414 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32795960 32795960 PRJNA550047_P_NODE_387260_length_270_cov_4.939086_g385288_i0 PRJNA550047 387260 270 4.939086 13.3355322 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 69.3 5.45e-12   NR HYT42276.1 2072417 g385288 i0 43.9 2.15555555555556 98 46 98.9 2 2 268 74 171 HYT42276.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 582 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;