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contig_metadata

26 rows where bioproject = "PRJNA550047" and tax_phylum = "Abditibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 26 ✖

tax_kingdom 1

bioproject 1

  • PRJNA550047 · 26 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5622376 5622376 PRJNA550047_P_NODE_7065_length_693_cov_15.803226_g5403_i0 PRJNA550047 7065 693 15.803226 109.51635618 Abditibacteriota bacterium 2783868 Bacteria Bacteria 518 5.67e-142   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g5403 i0 86.307 309.005772005772 482 59 69 7 210 688 2851210 2851687 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 214141 518 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
9442581 9442581 PRJNA550047_P_NODE_259348_length_300_cov_5.392070_g257379_i0 PRJNA550047 259348 300 5.39207 16.17621 Abditibacteriota bacterium 2783868 Bacteria Bacteria 165 3.44e-36   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g257379 i0 93.636 102 110 7 37 0 151 260 2852038 2851929 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 30600 165 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
9443564 9443564 PRJNA550047_P_NODE_334708_length_291_cov_3.325688_g332738_i0 PRJNA550047 334708 291 3.325688 9.67775208 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 142 2.41e-38   NR MBV9866913.1 2800791 g332738 i0 71.9 0.989690721649485 96 27 99 0 288 1 205 300 MBV9866913.1 sigma-70 family RNA polymerase sigma factor [Abditibacteriaceae bacterium] diamond 288 142 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
13268637 13268637 PRJNA550047_P_NODE_301731_length_297_cov_6.321429_g299762_i0 PRJNA550047 301731 297 6.321429 18.77464413 Abditibacteriota bacterium 2783868 Bacteria Bacteria 219 2.57e-52   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g299762 i0 92.715 0.508417508417508 151 11 51 0 2 152 2431857 2432007 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 151 219 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
19641239 19641239 PRJNA550047_P_NODE_320296_length_294_cov_10.099548_g318326_i0 PRJNA550047 320296 294 10.099548 29.69267112 Abditibacteriota bacterium 2783868 Bacteria Bacteria 300 8.82e-77   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g318326 i0 86.909 367.772108843537 275 27 91 8 1 269 2852514 2852243 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 108125 300 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
20915125 20915125 PRJNA550047_P_NODE_157117_length_345_cov_4.261029_g155157_i0 PRJNA550047 157117 345 4.261029 14.70055005 Abditibacterium sp. 2109264 Bacteria Bacteria 85.9 5.06e-18   NR HEX9996098.1 2109264 g155157 i0 76.2 1.9304347826087 105 23 89.6 1 343 35 102 206 HEX9996098.1 single-stranded DNA-binding protein [Abditibacterium sp.] diamond 666 85.9 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
20918435 20918435 PRJNA550047_P_NODE_4277_length_901_cov_6.851449_g2814_i0 PRJNA550047 4277 901 6.851449 61.73155549 Abditibacteriota bacterium 2783868 Bacteria Bacteria 363 3.7e-95   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g2814 i0 95.964 147.623751387347 223 9 88 0 677 899 2851262 2851040 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 133009 363 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
22193734 22193734 PRJNA550047_P_NODE_479678_length_237_cov_9.109756_g477705_i0 PRJNA550047 479678 237 9.109756 21.59012172 Abditibacteriota bacterium 2783868 Bacteria Bacteria 339 1.4599999999999998e-88   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g477705 i0 92.405 215.936708860759 237 18 100 0 1 237 2851888 2851652 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 51177 339 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
26761487 26761487 PRJNA550047_P_NODE_424101_length_256_cov_3.939891_g422129_i0 PRJNA550047 424101 256 3.939891 10.08612096 Abditibacteriota bacterium 2783868 Bacteria Bacteria 62 6.59e-9   NR BCM89243.1 2783868 g422129 i0 62.5 0.46875 40 15 46.9 0 121 2 1 40 BCM89243.1 hypothetical protein IAD21_01088 [Abditibacteriota bacterium] diamond 120 62 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
27014733 27014733 PRJNA550047_P_NODE_374182_length_275_cov_7.465347_g372210_i0 PRJNA550047 374182 275 7.465347 20.52970425 Abditibacterium sp. 2109264 Bacteria Bacteria 131 1.68e-35   NR HEX9997427.1 2109264 g372210 i0 64.8 1.96363636363636 91 32 99.3 0 275 3 182 272 HEX9997427.1 CpsB/CapC family capsule biosynthesis tyrosine phosphatase [Abditibacterium sp.] diamond 540 131 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
27140982 27140982 PRJNA550047_P_NODE_518782_length_224_cov_8.695364_g516809_i0 PRJNA550047 518782 224 8.695364 19.47761536 Abditibacteriota bacterium 2783868 Bacteria Bacteria 139 1.14e-36   NR MDF2441298.1 2783868 g516809 i0 90.5 0.991071428571429 74 7 99.1 0 2 223 234 307 MDF2441298.1 iron(III) transport system permease protein [Abditibacteriota bacterium] diamond 222 139 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
27236105 27236105 PRJNA550047_P_NODE_436003_length_251_cov_18.185393_g434031_i0 PRJNA550047 436003 251 18.185393 45.64533643 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 153 3.29e-41   NR HEX8549998.1 2800791 g434031 i0 81.9 0.99203187250996006 83 15 99.2 0 3 251 46 128 HEX8549998.1 beta-galactosidase [Abditibacteriaceae bacterium] diamond 249 153 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
27330999 27330999 PRJNA550047_P_NODE_230083_length_301_cov_6.241228_g228114_i0 PRJNA550047 230083 301 6.2412280000000004 18.78609628 Abditibacteriota bacterium 2783868 Bacteria Bacteria 69.7 5.02e-12   NR BCM93833.1 2783868 g228114 i0 69 0.837209302325581 42 13 41.9 0 299 174 168 209 BCM93833.1 hypothetical protein IAD21_05724 [Abditibacteriota bacterium] diamond 252 69.7 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
27994120 27994120 PRJNA550047_P_NODE_302425_length_297_cov_5.459821_g300456_i0 PRJNA550047 302425 297 5.459821 16.21566837 Abditibacteriota bacterium 2783868 Bacteria Bacteria 45.8 0.00502   NR BCM91573.1 2783868 g300456 i0 56.8 0.373737373737374 37 14 37.4 1 288 178 193 227 BCM91573.1 hypothetical protein IAD21_03448 [Abditibacteriota bacterium] diamond 111 45.8 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
28577062 28577062 PRJNA550047_P_NODE_394267_length_267_cov_7.757732_g392295_i0 PRJNA550047 394267 267 7.757732 20.71314444 Bacteria 2 Bacteria Bacteria 81.6 2.11e-17   NR WP_157947585.1 1960156 g392295 i0 49.4 2.64044943820225 79 36 88.8 1 239 3 5 79 WP_157947585.1 (deoxy)nucleoside triphosphate pyrophosphohydrolase [Abditibacterium utsteinense] diamond 705 82.4 0.990291262135922 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
29208736 29208736 PRJNA550047_P_NODE_274249_length_299_cov_8.265487_g272280_i0 PRJNA550047 274249 299 8.265487 24.71380613 Abditibacterium 2109263 Bacteria Bacteria 97.1 3.14e-21   NR WP_105483756.1 1960156 g272280 i0 90.2 1.53511705685619 51 5 51.2 0 156 4 33 83 WP_105483756.1 chorismate synthase [Abditibacterium utsteinense] diamond 459 97.4 0.996919917864476 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
29271527 29271527 PRJNA550047_P_NODE_563069_length_209_cov_11.558824_g561096_i0 PRJNA550047 563069 209 11.558824 24.15794216 Abditibacterium 2109263 Bacteria Bacteria 121 5.57e-30   NR WP_106380971.1 1960156 g561096 i0 85.5 2.97129186602871 69 10 99 0 207 1 477 545 WP_106380971.1 DNA mismatch repair protein MutS [Abditibacterium utsteinense] diamond 621 122 0.991803278688525 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
29524366 29524366 PRJNA550047_P_NODE_200450_length_343_cov_3.181481_g198489_i0 PRJNA550047 200450 343 3.181481 10.91247983 Abditibacterium 2109263 Bacteria Bacteria 62.4 6.27e-9   NR WP_123580803.1 1960156 g198489 i0 64.6 0.839650145772595 48 17 42 0 197 340 39 86 WP_123580803.1 methyltransferase family protein [Abditibacterium utsteinense] diamond 288 62.4 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
29730300 29730300 PRJNA550047_P_NODE_255350_length_300_cov_6.938326_g253381_i0 PRJNA550047 255350 300 6.938326 20.814978 Abditibacterium sp. 2109264 Bacteria Bacteria 105 9.28e-24   NR HEX9995935.1 2109264 g253381 i0 37.4 1.9 190 19 90 1 298 29 1592 1781 HEX9995935.1 hypothetical protein [Abditibacterium sp.] diamond 570 105 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
29793490 29793490 PRJNA550047_P_NODE_141451_length_345_cov_5.272059_g139491_i0 PRJNA550047 141451 345 5.272059 18.18860355 Abditibacterium sp. 2109264 Bacteria Bacteria 89 5.1e-18   NR HEX9998514.1 2109264 g139491 i0 58.5 1.43478260869565 82 31 71.3 1 5 250 342 420 HEX9998514.1 hypothetical protein [Abditibacterium sp.] diamond 495 89 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
30299805 30299805 PRJNA550047_P_NODE_89772_length_345_cov_9.477941_g87812_i0 PRJNA550047 89772 345 9.477941 32.69889645 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 50.4 2.46e-4   NR HVF10378.1 2800791 g87812 i0 53.1 0.426086956521739 49 23 42.6 0 4 150 921 969 HVF10378.1 tetratricopeptide repeat protein [Abditibacteriaceae bacterium] diamond 147 50.4 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
30331337 30331337 PRJNA550047_P_NODE_368892_length_277_cov_9.406863_g366921_i0 PRJNA550047 368892 277 9.406863 26.05701051 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 55.8 1.34e-6   NR HEY0073968.1 2800791 g366921 i0 37.1 1.67870036101083 97 55 99.6 2 2 277 57 152 HEY0073968.1 DUF58 domain-containing protein [Abditibacteriaceae bacterium] diamond 465 55.8 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31120468 31120468 PRJNA550047_P_NODE_565115_length_208_cov_21.370370_g563142_i0 PRJNA550047 565115 208 21.37037 44.4503696 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 126 6.84e-32   NR HEY0074600.1 2800791 g563142 i0 89.7 0.980769230769231 68 7 98.1 0 206 3 710 777 HEY0074600.1 GH116 family glycosyl hydrolase [Abditibacteriaceae bacterium] diamond 204 126 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31261893 31261893 PRJNA550047_P_NODE_274635_length_299_cov_7.991150_g272666_i0 PRJNA550047 274635 299 7.99115 23.8935385 Bacteria 2 Bacteria Bacteria 72.8 1.93e-12   NR WP_105483686.1 1960156 g272666 i0 70 1.00334448160535 50 15 50.2 0 150 1 229 278 WP_105483686.1 M16 family metallopeptidase [Abditibacterium utsteinense] diamond 300 73.2 0.994535519125683 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
32101099 32101099 PRJNA550047_P_NODE_124178_length_345_cov_6.463235_g122218_i0 PRJNA550047 124178 345 6.463235 22.29816075 Abditibacterium sp. 2109264 Bacteria Bacteria 147 1.39e-39   NR HEX8465334.1 2109264 g122218 i0 68.1 0.982608695652174 113 34 98.3 1 5 343 140 250 HEX8465334.1 Gfo/Idh/MocA family oxidoreductase [Abditibacterium sp.] diamond 339 147 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
32322921 32322921 PRJNA550047_P_NODE_106099_length_345_cov_7.897059_g104139_i0 PRJNA550047 106099 345 7.897059 27.24485355 Abditibacteriota bacterium 2783868 Bacteria Bacteria 95.1 5.83e-22   NR MDF2439415.1 2783868 g104139 i0 83.3 0.417391304347826 48 8 41.7 0 146 3 112 159 MDF2439415.1 cytochrome c oxidase subunit [Abditibacteriota bacterium] diamond 144 95.1 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;