RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA550047" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 7 ✖

bioproject 1

  • PRJNA550047 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
514609 514609 PRJNA550047_P_NODE_299201_length_297_cov_9.696429_g297232_i0 PRJNA550047 299201 297 9.696429 28.79839413 Inoviridae sp. 2219103 Viruses Viruses 224 5.53e-54   NTclustered gi|2054441676|tpg|BK036156.1| 2219103 g297232 i0 95.07 1.44107744107744 142 7 48 0 150 291 5090 5231 MAG TPA_asm: Inoviridae sp. isolate ctILX2, partial genome blastn 428 224 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
6895589 6895589 PRJNA550047_P_NODE_546026_length_215_cov_6.169014_g544053_i0 PRJNA550047 546026 215 6.169014 13.2633801 Inoviridae sp. 2219103 Viruses Viruses 344 2.7899999999999998e-90   NTclustered gi|2059577653|tpg|BK036636.1| 2219103 g544053 i0 95.775 200.786046511628 213 9 99 0 3 215 6681 6893 MAG TPA_asm: Inoviridae sp. isolate ctCVc5, partial genome blastn 43169 344 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
9443301 9443301 PRJNA550047_P_NODE_314548_length_295_cov_8.797297_g312579_i0 PRJNA550047 314548 295 8.797297 25.95202615 Inoviridae sp. 2219103 Viruses Viruses 278 4.15e-70   NTclustered gi|2057891989|tpg|BK051014.1| 2219103 g312579 i0 99.346 1.01694915254237 153 1 100 0 1 153 3120 2968 MAG TPA_asm: Inoviridae sp. isolate ctfkp1, partial genome blastn 300 278 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
14545210 14545210 PRJNA550047_P_NODE_42512_length_365_cov_10.013699_g40557_i0 PRJNA550047 42512 365 10.013699 36.55000135 Inoviridae sp. 2219103 Viruses Viruses 405 2.31e-108   NTclustered gi|1436210078|gb|MH617262.1| 2219103 g40557 i0 99.111 0.841095890410959 225 2 81 0 141 365 5502 5726 MAG: Inoviridae sp. isolate ctcg5, complete genome blastn 307 405 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
14546811 14546811 PRJNA550047_P_NODE_55272_length_345_cov_17.176471_g53312_i0 PRJNA550047 55272 345 17.176471 59.25882495 Inoviridae sp. 2219103 Viruses Viruses 278 4.9500000000000006e-70   NTclustered gi|2056839431|tpg|BK044096.1| 2219103 g53312 i0 100 1.70434782608696 150 0 87 0 1 150 1689 1540 MAG TPA_asm: Inoviridae sp. isolate ctx2K3, partial genome blastn 588 278 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
15815561 15815561 PRJNA550047_P_NODE_134353_length_345_cov_5.746324_g132393_i0 PRJNA550047 134353 345 5.746324 19.8248178 Inoviridae sp. 2219103 Viruses Viruses 279 1.38e-70   NTclustered gi|2059604206|tpg|BK037164.1| 2219103 g132393 i0 100 11.6579710144928 151 0 87 0 1 151 12205 12355 MAG TPA_asm: Inoviridae sp. isolate ctPvE6, partial genome blastn 4022 279 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
17091263 17091263 PRJNA550047_P_NODE_213374_length_301_cov_31.355263_g211405_i0 PRJNA550047 213374 301 31.355263 94.37934163 Inoviridae sp. 2219103 Viruses Viruses 145 4.49e-30   NTclustered gi|1436210078|gb|MH617262.1| 2219103 g211405 i0 98.765 0.269102990033223 81 1 27 0 1 81 5727 5807 MAG: Inoviridae sp. isolate ctcg5, complete genome blastn 81 145 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;