RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA550047", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA550047 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13270156 13270156 PRJNA550047_P_NODE_420251_length_257_cov_9.375000_g418279_i0 PRJNA550047 420251 257 9.375 24.09375 Nematocida 586132 Fungi Fungi 111 1.07e-26   NR KAI5173146.1 2670340 g418279 i0 60 2.97665369649805 85 34 99.2 0 2 256 80 164 KAI5173146.1 serine/threonine protein kinase KIN1/2 [Nematocida sp. LUAm3] diamond 765 112 0.991071428571429 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida sp. LUAm3
18367509 18367509 PRJNA550047_P_NODE_391275_length_268_cov_10.261538_g389303_i0 PRJNA550047 391275 268 10.261538 27.50092184 Vairimorpha ceranae 40302 Fungi Fungi 496 9.429999999999999e-136   NTclustered gi|1372265352|ref|XM_024475180.1| 40302 g389303 i0 100 1 268 0 100 0 1 268 210 477 Nosema ceranae guanine nucleotide-binding protein beta subunit 2 (AAJ76_3200038871), partial mRNA blastn 268 496 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae
29762071 29762071 PRJNA550047_P_NODE_421451_length_257_cov_3.375000_g419479_i0 PRJNA550047 421451 257 3.375 8.67375 Enterospora canceri 1081671 Fungi Fungi 162 9.63e-45   NR ORD93312.1 1081671 g419479 i0 98.8 0.980544747081712 84 1 98.1 0 5 256 176 259 ORD93312.1 hypothetical protein ECANGB1_251 [Enterospora canceri] diamond 252 162 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterospora Enterospora canceri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;