contig_metadata
8 rows where bioproject = "PRJNA550047", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6894159 | 6894159 | PRJNA550047_P_NODE_430386_length_253_cov_16.427778_g428414_i0 | PRJNA550047 | 430386 | 253 | 16.427778 | 41.56227834 | Lentisphaera araneosa | 256847 | Bacteria | Bacteria | 126 | 1.15e-31 | NR | WP_007280412.1 | 256847 | g428414 | i0 | 71.1 | 1.93280632411067 | 83 | 24 | 98.4 | 0 | 251 | 3 | 495 | 577 | WP_007280412.1 3'-5' exonuclease [Lentisphaera araneosa] | diamond | 489 | 126 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaerales | Lentisphaeraceae | Lentisphaera | Lentisphaera araneosa | |
| 14545765 | 14545765 | PRJNA550047_P_NODE_467712_length_241_cov_10.720238_g465739_i0 | PRJNA550047 | 467712 | 241 | 10.720238 | 25.83577358 | Victivallales bacterium CCUG 44730 | 2094242 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1359122976|gb|CP027227.1| | 2094242 | g465739 | i0 | 100 | 0.116182572614108 | 28 | 0 | 12 | 0 | 186 | 213 | 2434413 | 2434440 | Victivallales bacterium CCUG 44730 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Victivallales | Victivallales bacterium CCUG 44730 | |||
| 27029509 | 27029509 | PRJNA550047_P_NODE_299802_length_297_cov_8.799107_g297833_i0 | PRJNA550047 | 299802 | 297 | 8.799107 | 26.13334779 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 50.1 | 1.83e-4 | NR | OGV64412.1 | 1798577 | g297833 | i0 | 52.1 | 1.14141414141414 | 48 | 23 | 48.5 | 0 | 146 | 3 | 429 | 476 | OGV64412.1 MAG: hypothetical protein A3K18_03655 [Lentisphaerae bacterium RIFOXYA12_64_32] | diamond | 339 | 50.4 | 0.994047619047619 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerae bacterium RIFOXYA12_64_32 | |||||
| 27867676 | 27867676 | PRJNA550047_P_NODE_472305_length_240_cov_2.898204_g470332_i0 | PRJNA550047 | 472305 | 240 | 2.898204 | 6.9556896 | Lentisphaerota bacterium | 1932692 | Bacteria | Bacteria | 137 | 1.41e-35 | NR | MBM4163442.1 | 1932692 | g470332 | i0 | 77.2 | 0.9875 | 79 | 18 | 98.8 | 0 | 2 | 238 | 310 | 388 | MBM4163442.1 asparagine synthase (glutamine-hydrolyzing) [Lentisphaerota bacterium] | diamond | 237 | 137 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 28531026 | 28531026 | PRJNA550047_P_NODE_483547_length_236_cov_5.208589_g481574_i0 | PRJNA550047 | 483547 | 236 | 5.208589 | 12.29227004 | Victivallales bacterium | 2212475 | Bacteria | Bacteria | 55.1 | 1.54e-6 | NR | MEI3038328.1 | 2212475 | g481574 | i0 | 59.1 | 0.559322033898305 | 44 | 17 | 55.9 | 1 | 146 | 15 | 1 | 43 | MEI3038328.1 sugar-binding protein [Victivallales bacterium] | diamond | 132 | 55.1 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Victivallales | Victivallales bacterium | |||
| 29681873 | 29681873 | PRJNA550047_P_NODE_70790_length_345_cov_12.224265_g68830_i0 | PRJNA550047 | 70790 | 345 | 12.224265 | 42.17371425 | Lentisphaerota | 256845 | Bacteria | Bacteria | 59.7 | 3.58e-8 | NR | WP_307260376.1 | 760260 | g68830 | i0 | 56 | 1.30434782608696 | 50 | 22 | 43.5 | 0 | 196 | 345 | 38 | 87 | WP_307260376.1 D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase [Oligosphaera ethanolica] | diamond | 450 | 60.1 | 0.993344425956739 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Oligosphaeria | Oligosphaerales | Oligosphaeraceae | Oligosphaera | Oligosphaera ethanolica | |
| 30882616 | 30882616 | PRJNA550047_P_NODE_354934_length_283_cov_6.119048_g352963_i0 | PRJNA550047 | 354934 | 283 | 6.119048 | 17.31690584 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 44.3 | 0.0175 | NR | MBE6371967.1 | 1932692 | g352963 | i0 | 59 | 2.89399293286219 | 39 | 16 | 41.3 | 0 | 280 | 164 | 544 | 582 | MBE6371967.1 hypothetical protein [Lentisphaerota bacterium] | diamond | 819 | 44.7 | 0.991051454138702 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 32590628 | 32590628 | PRJNA550047_P_NODE_430579_length_253_cov_14.483333_g428607_i0 | PRJNA550047 | 430579 | 253 | 14.483333 | 36.64283249 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 72.4 | 7.77e-14 | NR | NLB55125.1 | 1932692 | g428607 | i0 | 66 | 5.09881422924901 | 50 | 17 | 59.3 | 0 | 103 | 252 | 25 | 74 | NLB55125.1 translesion error-prone DNA polymerase V autoproteolytic subunit [Lentisphaerota bacterium] | diamond | 1290 | 72.8 | 0.994505494505495 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;