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contig_metadata

11 rows where bioproject = "PRJNA550047", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 11 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 11 ✖

bioproject 1

  • PRJNA550047 · 11 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
518284 518284 PRJNA550047_P_NODE_60201_length_345_cov_14.900735_g58241_i0 PRJNA550047 60201 345 14.900735 51.40753575 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 92.4 4.74e-19   NR MBI5149160.1 2035772 g58241 i0 76 1.7304347826087 50 11 42.6 1 342 196 327 376 MBI5149160.1 DUF3536 domain-containing protein [Candidatus Omnitrophota bacterium] diamond 597 92.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
26983117 26983117 PRJNA550047_P_NODE_391502_length_268_cov_8.794872_g389530_i0 PRJNA550047 391502 268 8.794872 23.57025696 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 66.6 2.01e-10   NR MBU4311117.1 2035772 g389530 i0 47.4 0.638059701492537 57 30 63.8 0 8 178 731 787 MBU4311117.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 171 66.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28088792 28088792 PRJNA550047_P_NODE_86385_length_345_cov_9.871324_g84425_i0 PRJNA550047 86385 345 9.871324 34.0560678 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 94.7 6.53e-20   NR HOW43150.1 2035772 g84425 i0 95.8 0.417391304347826 48 2 41.7 0 200 343 247 294 HOW43150.1 recombinase family protein [Candidatus Omnitrophota bacterium] diamond 144 94.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28152156 28152156 PRJNA550047_P_NODE_460065_length_244_cov_0.912281_g458092_i0 PRJNA550047 460065 244 0.912281 2.22596564 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 95.5 2.9700000000000003e-21   NR MFH1594235.1 2035772 g458092 i0 56.4 0.959016393442623 78 32 93.4 1 230 3 1 78 MFH1594235.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA [Candidatus Omnitrophota bacterium] diamond 234 95.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28152207 28152207 PRJNA550047_P_NODE_55965_length_345_cov_16.790441_g54005_i0 PRJNA550047 55965 345 16.790441 57.92702145 Candidatus Omnitrophica bacterium CG 2035772 Bacteria Bacteria 52.8 3.64e-5   NR PIU40630.1 1974742 g54005 i0 60.5 0.373913043478261 43 17 37.4 0 150 22 466 508 PIU40630.1 MAG: hypothetical protein COT00_00710, partial [Candidatus Omnitrophica bacterium CG07_land_8_20_14_0_80_50_8] diamond 129 52.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium CG07_land_8_20_14_0_80_50_8
29067815 29067815 PRJNA550047_P_NODE_603808_length_197_cov_5.225806_g601835_i0 PRJNA550047 603808 197 5.225806 10.29483782 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 76.6 2.28e-14   NR MFH0855267.1 2035772 g601835 i0 64.4 0.898477157360406 59 21 89.8 0 13 189 17 75 MFH0855267.1 glycoside hydrolase family 2 TIM barrel-domain containing protein [Candidatus Omnitrophota bacterium] diamond 177 76.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30172783 30172783 PRJNA550047_P_NODE_387532_length_270_cov_3.390863_g385560_i0 PRJNA550047 387532 270 3.390863 9.1553301 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 176 3.57e-51   NR MDP3704181.1 2035772 g385560 i0 95.6 3 90 4 100 0 270 1 80 169 MDP3704181.1 recombinase family protein [Candidatus Omnitrophota bacterium] diamond 810 176 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30236004 30236004 PRJNA550047_P_NODE_282212_length_299_cov_2.491150_g280243_i0 PRJNA550047 282212 299 2.49115 7.4485385 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 45.1 0.0108   NR MCB9746782.1 2035772 g280243 i0 33 1.06354515050167 106 47 99.3 2 3 299 189 277 MCB9746782.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 318 45.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30236150 30236150 PRJNA550047_P_NODE_64532_length_345_cov_13.617647_g62572_i0 PRJNA550047 64532 345 13.617647 46.98088215 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 59.3 1.92e-7   NR MBU2102352.1 2035772 g62572 i0 56 0.434782608695652 50 22 43.5 0 1 150 687 736 MBU2102352.1 ATP-binding protein [Candidatus Omnitrophota bacterium] diamond 150 59.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32133018 32133018 PRJNA550047_P_NODE_406798_length_262_cov_9.835979_g404826_i0 PRJNA550047 406798 262 9.835979 25.77026498 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 91.7 3.59e-20   NR MCL5096915.1 2035772 g404826 i0 57.3 0.938931297709924 82 35 93.9 0 3 248 41 122 MCL5096915.1 PfkB family carbohydrate kinase [Candidatus Omnitrophota bacterium] diamond 246 91.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32764605 32764605 PRJNA550047_P_NODE_290300_length_298_cov_7.111111_g288331_i0 PRJNA550047 290300 298 7.111111 21.19111078 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 92 3.54e-19   NR HAZ10859.1 2035772 g288331 i0 76.6 0.644295302013423 64 10 64.4 1 296 105 6493 6551 HAZ10859.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 192 92 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;