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contig_metadata

10 rows where bioproject = "PRJNA550047", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 10 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 10 ✖

bioproject 1

  • PRJNA550047 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10720824 10720824 PRJNA550047_P_NODE_45809_length_353_cov_4.439286_g43853_i0 PRJNA550047 45809 353 4.439286 15.67067958 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 545 1.26e-150   NTclustered gi|56757963|gb|AY815390.1| 6182 g43853 i0 95.143 122.325779036827 350 10 99 4 1 349 1709 1366 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 43181 545 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
11325315 11325315 PRJNA550047_P_NODE_58269_length_345_cov_15.676471_g56309_i0 PRJNA550047 58269 345 15.676471 54.08382495 Syndesmis 2019368 Platyhelminthes Platyhelminthes 52.8 0.033   NTclustered gi|1858375041|gb|MT622643.1| 2019369 g56309 i0 100 0.16231884057971 28 0 8 0 122 149 5069 5042 Syndesmis echinorum small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Umagillidae Syndesmis Syndesmis echinorum
13268566 13268566 PRJNA550047_P_NODE_296691_length_297_cov_15.075893_g294722_i0 PRJNA550047 296691 297 15.075893 44.77540221 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.028   NTclustered gi|690453429|emb|LN000365.1| 99802 g294722 i0 96.875 0.107744107744108 32 0 10 1 151 181 9220 9251 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0000364 blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
18368372 18368372 PRJNA550047_P_NODE_45915_length_352_cov_14.060932_g43958_i0 PRJNA550047 45915 352 14.060932 49.49448064 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 267 1.09e-66   NTclustered gi|60698656|gb|AY915745.1| 6182 g43958 i0 98.667 13.8465909090909 150 2 43 0 203 352 161 310 Schistosoma japonicum SJCHGC09658 protein mRNA, partial cds blastn 4874 267 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
20917142 20917142 PRJNA550047_P_NODE_323817_length_294_cov_1.742081_g321847_i0 PRJNA550047 323817 294 1.742081 5.12171814 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 169 2.6000000000000002e-37   NTclustered gi|690647901|emb|LN195382.1| 99802 g321847 i0 93.75 0.727891156462585 112 7 38 0 1 112 233 122 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei, scaffold SPER_scaffold0167598 blastn 214 169 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
27394256 27394256 PRJNA550047_P_NODE_233843_length_301_cov_4.561404_g231874_i0 PRJNA550047 233843 301 4.561404 13.72982604 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 70.5 1.15e-13   NR AAX30323.2 6182 g231874 i0 75.6 0.448504983388704 45 11 44.9 0 1 135 23 67 AAX30323.2 SJCHGC03012 protein, partial [Schistosoma japonicum] diamond 135 70.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
28530907 28530907 PRJNA550047_P_NODE_219127_length_301_cov_12.701754_g217158_i0 PRJNA550047 219127 301 12.701754 38.23227954 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 68.6 2.43e-12   NR AAP06505.1 6182 g217158 i0 87.5 1.27574750830565 32 4 31.9 0 1 96 37 68 AAP06505.1 hypothetical protein [Schistosoma japonicum] diamond 384 68.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
29162562 29162562 PRJNA550047_P_NODE_391049_length_268_cov_11.948718_g389077_i0 PRJNA550047 391049 268 11.948718 32.02256424 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 79 1.27e-15   NR PAA64968.1 282301 g389077 i0 47.7 1.92537313432836 86 32 96.3 2 1 258 110 182 PAA64968.1 hypothetical protein BOX15_Mlig003539g1 [Macrostomum lignano] diamond 516 79 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
30819486 30819486 PRJNA550047_P_NODE_185994_length_344_cov_17.350554_g184033_i0 PRJNA550047 185994 344 17.350554 59.68590576 Hymenolepididae 6214 Platyhelminthes Platyhelminthes 57 1.17e-6   NR CDS28462.1 85433 g184033 i0 78.6 0.880813953488372 28 6 24.4 0 338 255 303 330 CDS28462.1 GPI mannosyltransferase 3 [Hymenolepis microstoma] diamond 303 57 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
32747859 32747859 PRJNA550047_P_NODE_142160_length_345_cov_5.227941_g140200_i0 PRJNA550047 142160 345 5.227941 18.03639645 Platyhelminthes 6157 Platyhelminthes Platyhelminthes 66.2 7.26e-10   NR CAL5139899.1 300641 g140200 i0 60.9 1.70434782608696 46 18 40 0 1 138 749 794 CAL5139899.1 unnamed protein product [Calicophoron daubneyi] diamond 588 66.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Paramphistomidae Calicophoron Calicophoron daubneyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;