contig_metadata
14 rows where bioproject = "PRJNA550047", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11325595 | 11325595 | PRJNA550047_P_NODE_88849_length_345_cov_9.584559_g86889_i0 | PRJNA550047 | 88849 | 345 | 9.584559 | 33.06672855 | Pristionchus pacificus | 54126 | Nematoda | Nematoda | 67.4 | 2.6e-10 | NR | KAF8370508.1 | 54126 | g86889 | i0 | 40.7 | 4.72173913043478 | 113 | 30 | 94.8 | 2 | 18 | 344 | 54 | 133 | KAF8370508.1 hypothetical protein PRIPAC_76937 [Pristionchus pacificus] | diamond | 1629 | 67.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus pacificus | |
| 11995488 | 11995488 | PRJNA550047_P_NODE_448370_length_247_cov_16.298851_g446398_i0 | PRJNA550047 | 448370 | 247 | 16.298851 | 40.25816197 | Trichinella spiralis | 6334 | Nematoda | Nematoda | 52.8 | 0.022 | NTclustered | gi|109716040|gb|AC188121.1| | 6334 | g446398 | i0 | 96.875 | 0.129554655870445 | 32 | 0 | 13 | 1 | 194 | 225 | 103062 | 103092 | Trichinella spiralis chromosome UNK clone TS195-46H12, complete sequence | blastn | 32 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Enoplea | Trichinellida | Trichinellidae | Trichinella | Trichinella spiralis | |
| 15149799 | 15149799 | PRJNA550047_P_NODE_473852_length_239_cov_9.265060_g471879_i0 | PRJNA550047 | 473852 | 239 | 9.26506 | 22.1434934 | Oscheius | 42476 | Nematoda | Nematoda | 442 | 1.0899999999999994e-119 | NTclustered | gi|158827543|gb|EU196009.1| | 141969 | g471879 | i0 | 100 | 89.7824267782427 | 239 | 0 | 100 | 0 | 1 | 239 | 644 | 882 | Oscheius tipulae strain CEW1 18S ribosomal RNA gene, partial sequence | blastn | 21458 | 442 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Oscheius | Oscheius tipulae | |
| 22192792 | 22192792 | PRJNA550047_P_NODE_398378_length_265_cov_15.958333_g396406_i0 | PRJNA550047 | 398378 | 265 | 15.958333 | 42.28958245 | Necator americanus | 51031 | Nematoda | Nematoda | 90.5 | 5.5e-19 | NR | ETN79634.1 | 51031 | g396406 | i0 | 100 | 0.486792452830189 | 43 | 0 | 48.7 | 0 | 264 | 136 | 388 | 430 | ETN79634.1 hypothetical protein NECAME_18089 [Necator americanus] | diamond | 129 | 90.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Ancylostomatidae | Necator | Necator americanus | |
| 24073730 | 24073730 | PRJNA550047_P_NODE_4779_length_844_cov_26.974060_g3266_i0 | PRJNA550047 | 4779 | 844 | 26.97406 | 227.6610664 | Metazoa | 33208 | Nematoda | Nematoda | 942 | 0 | NTclustered | gi|1174020828|gb|KY887583.1| | 6293 | g3266 | i0 | 99.805 | 81.4632701421801 | 514 | 0 | 81 | 1 | 1 | 514 | 1147 | 635 | Wuchereria bancrofti isolate AP10 small subunit ribosomal RNA gene, partial sequence | blastn | 68755 | 950 | 0.991578947368421 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Wuchereria | Wuchereria bancrofti | |
| 26666237 | 26666237 | PRJNA550047_P_NODE_257561_length_300_cov_6.074890_g255592_i0 | PRJNA550047 | 257561 | 300 | 6.07489 | 18.22467 | Brugia malayi | 6279 | Nematoda | Nematoda | 43.5 | 0.0382 | NR | CDP96015.1 | 6279 | g255592 | i0 | 31.9 | 0.72 | 72 | 48 | 72 | 1 | 14 | 229 | 286 | 356 | CDP96015.1 Bm14719, isoform b [Brugia malayi] | diamond | 216 | 43.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Brugia | Brugia malayi | |
| 27756443 | 27756443 | PRJNA550047_P_NODE_372944_length_275_cov_20.777228_g370972_i0 | PRJNA550047 | 372944 | 275 | 20.777228 | 57.137377 | Opisthokonta | 33154 | Nematoda | Nematoda | 53.5 | 2e-6 | NR | KIH47578.1 | 51022 | g370972 | i0 | 38.2 | 3.34909090909091 | 76 | 32 | 79.6 | 2 | 219 | 1 | 2 | 65 | KIH47578.1 hypothetical protein ANCDUO_22359 [Ancylostoma duodenale] | diamond | 921 | 53.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Ancylostomatidae | Ancylostoma | Ancylostoma duodenale | |
| 27882421 | 27882421 | PRJNA550047_P_NODE_223985_length_301_cov_9.276316_g222016_i0 | PRJNA550047 | 223985 | 301 | 9.276316 | 27.92171116 | Pristionchus | 54125 | Nematoda | Nematoda | 45.1 | 0.0116 | NR | GMS89523.1 | 358040 | g222016 | i0 | 53.8 | 1.64451827242525 | 39 | 18 | 38.9 | 0 | 158 | 274 | 102 | 140 | GMS89523.1 hypothetical protein PENTCL1PPCAC_11698, partial [Pristionchus entomophagus] | diamond | 495 | 45.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus entomophagus | |
| 28309959 | 28309959 | PRJNA550047_P_NODE_567166_length_208_cov_7.970370_g565193_i0 | PRJNA550047 | 567166 | 208 | 7.97037 | 16.5783696 | Halicephalobus sp. NKZ332 | 2598192 | Nematoda | Nematoda | 131 | 8.39e-34 | NR | KAE9550692.1 | 2598192 | g565193 | i0 | 95.7 | 0.995192307692308 | 69 | 3 | 99.5 | 0 | 1 | 207 | 117 | 185 | KAE9550692.1 hypothetical protein FO519_006093 [Halicephalobus sp. NKZ332] | diamond | 207 | 131 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Panagrolaimidae | Halicephalobus | Halicephalobus sp. NKZ332 | |
| 28594105 | 28594105 | PRJNA550047_P_NODE_480887_length_237_cov_3.493902_g478914_i0 | PRJNA550047 | 480887 | 237 | 3.493902 | 8.28054774 | Necator americanus | 51031 | Nematoda | Nematoda | 48.9 | 2.15e-4 | NR | XP_064060924.1 | 51031 | g478914 | i0 | 45.5 | 1.81012658227848 | 44 | 24 | 55.7 | 0 | 136 | 5 | 281 | 324 | XP_064060924.1 hypothetical protein RB195_014673 [Necator americanus] | diamond | 429 | 48.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Ancylostomatidae | Necator | Necator americanus | |
| 30472054 | 30472054 | PRJNA550047_P_NODE_286233_length_298_cov_11.702222_g284264_i0 | PRJNA550047 | 286233 | 298 | 11.702222 | 34.87262156 | Metazoa | 33208 | Nematoda | Nematoda | 59.3 | 1.14e-8 | NR | EYB92467.1 | 53326 | g284264 | i0 | 58.1 | 2.97986577181208 | 43 | 18 | 43.3 | 0 | 140 | 268 | 32 | 74 | EYB92467.1 hypothetical protein Y032_0193g1383 [Ancylostoma ceylanicum] | diamond | 888 | 59.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Ancylostomatidae | Ancylostoma | Ancylostoma ceylanicum | |
| 30535064 | 30535064 | PRJNA550047_P_NODE_322353_length_294_cov_5.728507_g320383_i0 | PRJNA550047 | 322353 | 294 | 5.728507 | 16.84181058 | Metazoa | 33208 | Nematoda | Nematoda | 55.8 | 1.74e-6 | NR | KAF8375090.1 | 54126 | g320383 | i0 | 52.4 | 0.908163265306122 | 42 | 20 | 42.9 | 0 | 258 | 133 | 91 | 132 | KAF8375090.1 hypothetical protein PRIPAC_81519 [Pristionchus pacificus] | diamond | 267 | 56.2 | 0.99288256227758 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus pacificus | |
| 30851050 | 30851050 | PRJNA550047_P_NODE_576394_length_205_cov_9.242424_g574421_i0 | PRJNA550047 | 576394 | 205 | 9.242424 | 18.9469692 | Nematoda | 6231 | Nematoda | Nematoda | 42.7 | 0.0147 | NR | MFH4983499.1 | 75299 | g574421 | i0 | 39.6 | 5.45853658536585 | 48 | 29 | 70.2 | 0 | 146 | 3 | 28 | 75 | MFH4983499.1 hypothetical protein [Gnathostoma spinigerum] | diamond | 1119 | 43.1 | 0.990719257540603 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Gnathostomatidae | Gnathostoma | Gnathostoma spinigerum | |
| 32890598 | 32890598 | PRJNA550047_P_NODE_547900_length_214_cov_10.992908_g545927_i0 | PRJNA550047 | 547900 | 214 | 10.992908 | 23.52482312 | Halicephalobus sp. NKZ332 | 2598192 | Nematoda | Nematoda | 97.8 | 9.01e-23 | NR | KAE9553614.1 | 2598192 | g545927 | i0 | 81 | 0.883177570093458 | 63 | 12 | 88.3 | 0 | 191 | 3 | 129 | 191 | KAE9553614.1 hypothetical protein FO519_003159 [Halicephalobus sp. NKZ332] | diamond | 189 | 97.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Panagrolaimidae | Halicephalobus | Halicephalobus sp. NKZ332 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;