RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA550047", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_phylum = "Candidatus Tectimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Tectimicrobiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA550047 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3067012 3067012 PRJNA550047_P_NODE_411683_length_260_cov_12.786096_g409711_i0 PRJNA550047 411683 260 12.786096 33.2438496 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 329 9.77e-86   NTclustered gi|2531976037|emb|OY282375.1| 312019 g409711 i0 89.615 155.334615384615 260 25 100 2 1 260 4200755 4200498 MAG: uncultured Candidatus Entotheonella sp. genome assembly, chromosome: 1 blastn 40387 329 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.
29541041 29541041 PRJNA550047_P_NODE_324170_length_293_cov_18.709091_g322200_i0 PRJNA550047 324170 293 18.709091 54.81763663 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 50.4 1.09e-4   NR MDQ3830886.1 2528274 g322200 i0 61.8 0.348122866894198 34 13 34.8 0 192 293 37 70 MDQ3830886.1 IS5 family transposase [Candidatus Tectimicrobiota bacterium] diamond 102 50.4 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;