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contig_metadata

22 rows where bioproject = "PRJNA550047", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 22 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 22 ✖

bioproject 1

  • PRJNA550047 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
513732 513732 PRJNA550047_P_NODE_227001_length_301_cov_7.640351_g225032_i0 PRJNA550047 227001 301 7.640351 22.99745651 Methanosphaera sp. BMS 1789762 Archaea Archaea 52.8 0.028   NTclustered gi|1409374143|gb|CP014213.1| 1789762 g225032 i0 100 0.0930232558139535 28 0 9 0 206 233 1540835 1540862 Methanosphaera sp. BMS chromosome, complete genome blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. BMS
515086 515086 PRJNA550047_P_NODE_334061_length_291_cov_5.697248_g332091_i0 PRJNA550047 334061 291 5.697248 16.57899168 Methanobrevibacter smithii 2173 Archaea Archaea 538 1.6999999999999994e-148   NTclustered gi|1294447101|gb|CP017803.1| 2173 g332091 i0 100 7 291 0 100 0 1 291 302261 301971 Methanobrevibacter smithii strain KB11 chromosome, complete genome blastn 2037 538 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
517428 517428 PRJNA550047_P_NODE_524961_length_222_cov_7.322148_g522988_i0 PRJNA550047 524961 222 7.322148 16.25516856 Methanobrevibacter smithii 2173 Archaea Archaea 399 6.099999999999999e-107   NTclustered gi|1294447101|gb|CP017803.1| 2173 g522988 i0 99.099 7 222 2 100 0 1 222 1692921 1693142 Methanobrevibacter smithii strain KB11 chromosome, complete genome blastn 1554 399 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
1121742 1121742 PRJNA550047_P_NODE_485861_length_235_cov_8.049383_g483888_i0 PRJNA550047 485861 235 8.049383 18.91605005 Methanobrevibacter 2172 Archaea Archaea 435 1.79e-117   NTclustered gi|2791693311|gb|CP144200.1| 2173 g483888 i0 100 11.9404255319149 235 0 100 0 1 235 1030675 1030441 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 2806 435 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
2396949 2396949 PRJNA550047_P_NODE_431382_length_253_cov_8.572222_g429410_i0 PRJNA550047 431382 253 8.572222 21.68772166 Methanobrevibacter 2172 Archaea Archaea 468 1.92e-127   NTclustered gi|2791693311|gb|CP144200.1| 2173 g429410 i0 100 7.58893280632411 253 0 100 0 1 253 556640 556388 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 1920 468 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
8166772 8166772 PRJNA550047_P_NODE_235387_length_301_cov_3.771930_g233418_i0 PRJNA550047 235387 301 3.77193 11.3535093 Methanobrevibacter smithii 2173 Archaea Archaea 274 5.49e-69   NTclustered gi|2791693311|gb|CP144200.1| 2173 g233418 i0 99.338 6.04983388704319 151 1 100 0 151 301 1350860 1350710 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 1821 274 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
10049570 10049570 PRJNA550047_P_NODE_345668_length_287_cov_3.028037_g343698_i0 PRJNA550047 345668 287 3.028037 8.69046619 Methanobrevibacter 2172 Archaea Archaea 525 1.2999999999999995e-144   NTclustered gi|2791693311|gb|CP144200.1| 2173 g343698 i0 99.652 153.623693379791 287 1 100 0 1 287 1473823 1473537 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 44090 525 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
10717185 10717185 PRJNA550047_P_NODE_155769_length_345_cov_4.349265_g153809_i0 PRJNA550047 155769 345 4.349265 15.00496425 Methanobrevibacter olleyae 294671 Archaea Archaea 182 3.989999999999999e-41   NTclustered gi|998157363|gb|CP014265.1| 294671 g153809 i0 89.041 0.846376811594203 146 16 42 0 1 146 1730177 1730032 Methanobrevibacter olleyae strain YLM1 chromosome, complete genome blastn 292 182 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter olleyae
12600440 12600440 PRJNA550047_P_NODE_414090_length_259_cov_15.854839_g412118_i0 PRJNA550047 414090 259 15.854839 41.06403301 Methanobrevibacter 2172 Archaea Archaea 479 9.13e-131   NTclustered gi|470484903|ref|NR_076674.1| 83816 g412118 i0 100 171.150579150579 259 0 100 0 1 259 2189 1931 Methanobrevibacter ruminantium strain M1 23S ribosomal RNA gene, complete sequence blastn 44328 479 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter ruminantium
13270232 13270232 PRJNA550047_P_NODE_427011_length_255_cov_3.384615_g425039_i0 PRJNA550047 427011 255 3.384615 8.63076825 Methanobrevibacter smithii 2173 Archaea Archaea 472 1.5e-128   NTclustered gi|2188913606|dbj|AP025587.1| 2173 g425039 i0 100 17.1254901960784 255 0 100 0 1 255 191348 191602 Methanobrevibacter smithii CE91-St68 DNA, complete genome blastn 4367 472 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
15148474 15148474 PRJNA550047_P_NODE_195012_length_344_cov_5.284133_g193051_i0 PRJNA550047 195012 344 5.284133 18.17741752 Methanobrevibacter 2172 Archaea Archaea 272 2.29e-68   NTclustered gi|2791693311|gb|CP144200.1| 2173 g193051 i0 99.333 6.11918604651163 150 1 88 0 195 344 243292 243441 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 2105 272 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
15821385 15821385 PRJNA550047_P_NODE_78213_length_345_cov_10.970588_g76253_i0 PRJNA550047 78213 345 10.970588 37.8485286 Methanobrevibacter smithii 2173 Archaea Archaea 276 1.78e-69   NTclustered gi|1294447101|gb|CP017803.1| 2173 g76253 i0 100 6.0463768115942 149 0 86 0 1 149 253701 253849 Methanobrevibacter smithii strain KB11 chromosome, complete genome blastn 2086 276 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
17094526 17094526 PRJNA550047_P_NODE_483414_length_236_cov_5.785276_g481441_i0 PRJNA550047 483414 236 5.785276 13.65325136 Methanobrevibacter smithii 2173 Archaea Archaea 403 5.07e-108   NTclustered gi|2188913606|dbj|AP025587.1| 2173 g481441 i0 97.458 7 236 6 100 0 1 236 1060626 1060391 Methanobrevibacter smithii CE91-St68 DNA, complete genome blastn 1652 403 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
20916015 20916015 PRJNA550047_P_NODE_235877_length_301_cov_3.504386_g233908_i0 PRJNA550047 235877 301 3.504386 10.54820186 Methanobrevibacter smithii 2173 Archaea Archaea 396 1.12e-105   NTclustered gi|1294447101|gb|CP017803.1| 2173 g233908 i0 89.728 7.80066445182724 331 4 100 1 1 301 111748 112078 Methanobrevibacter smithii strain KB11 chromosome, complete genome blastn 2348 396 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
21524247 21524247 PRJNA550047_P_NODE_567037_length_208_cov_8.570370_g565064_i0 PRJNA550047 567037 208 8.57037 17.8263696 Methanobrevibacter 2172 Archaea Archaea 379 7.359999999999998e-101   NTclustered gi|2791693311|gb|CP144200.1| 2173 g565064 i0 99.519 9.09134615384615 208 1 100 0 1 208 771760 771553 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 1891 379 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
24743966 24743966 PRJNA550047_P_NODE_551260_length_213_cov_9.357143_g549287_i0 PRJNA550047 551260 213 9.357143 19.93071459 Methanobrevibacter smithii 2173 Archaea Archaea 394 2.7e-105   NTclustered gi|148551077|gb|CP000678.1| 420247 g549287 i0 100 9.05164319248826 213 0 100 0 1 213 483369 483157 Methanobrevibacter smithii ATCC 35061, complete genome blastn 1928 394 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
28341272 28341272 PRJNA550047_P_NODE_175126_length_345_cov_2.988971_g173166_i0 PRJNA550047 175126 345 2.988971 10.31194995 Methanobrevibacter woesei 190976 Archaea Archaea 44.3 0.0345   NR WP_407373701.1 190976 g173166 i0 90 0.173913043478261 20 2 17.4 0 345 286 480 499 WP_407373701.1 phage tail protein [Methanobrevibacter woesei] diamond 60 44.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter woesei
28499290 28499290 PRJNA550047_P_NODE_159047_length_345_cov_4.132353_g157087_i0 PRJNA550047 159047 345 4.132353 14.25661785 Methanobacterium sp. 2164 Archaea Archaea 94 6.960000000000001e-21   NR HEY0196536.1 2164 g157087 i0 95.9 0.426086956521739 49 2 42.6 0 149 3 94 142 HEY0196536.1 TatD family hydrolase [Methanobacterium sp.] diamond 147 94 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
28594012 28594012 PRJNA550047_P_NODE_289147_length_298_cov_8.173333_g287178_i0 PRJNA550047 289147 298 8.173333 24.35653234 Methanobrevibacter sp. 66852 Archaea Archaea 95.5 3.88e-21   NR MBO5966653.1 66852 g287178 i0 96 1.00671140939597 50 2 50.3 0 296 147 75 124 MBO5966653.1 right-handed parallel beta-helix repeat-containing protein [Methanobrevibacter sp.] diamond 300 95.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
28594123 28594123 PRJNA550047_P_NODE_531527_length_220_cov_4.190476_g529554_i0 PRJNA550047 531527 220 4.190476 9.2190472 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 128 1.7299999999999998e-35   NR WP_296878004.1 253161 g529554 i0 91.7 0.981818181818182 72 6 98.2 0 218 3 58 129 WP_296878004.1 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT [uncultured Methanobrevibacter sp.] diamond 216 128 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
29888728 29888728 PRJNA550047_P_NODE_442371_length_249_cov_14.670455_g440399_i0 PRJNA550047 442371 249 14.670455 36.52943295 Methanobacteriaceae archaeon 2099680 Archaea Archaea 148 3.8399999999999985e-43   NR NYB27440.1 2099680 g440399 i0 97.6 0.987951807228916 82 2 98.8 0 247 2 107 188 NYB27440.1 hypothetical protein [Methanobacteriaceae archaeon] diamond 246 148 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
32764634 32764634 PRJNA550047_P_NODE_344300_length_287_cov_10.037383_g342330_i0 PRJNA550047 344300 287 10.037383 28.80728921 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 149 8.44e-42   NR WP_296784426.1 253161 g342330 i0 95.1 0.857142857142857 82 4 85.7 0 248 3 55 136 WP_296784426.1 GTP cyclohydrolase MptA [uncultured Methanobrevibacter sp.] diamond 246 149 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;