RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA550047", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 5 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 5 ✖

bioproject 1

  • PRJNA550047 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9445157 9445157 PRJNA550047_P_NODE_465368_length_242_cov_6.532544_g463395_i0 PRJNA550047 465368 242 6.532544 15.80875648 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 176 1.24e-39   NTclustered gi|2621703255|emb|OY762428.1| 2447898 g463395 i0 79.835 10.9462809917355 243 47 100 2 1 242 3022264 3022023 MAG: Candidatus Kapabacteria bacterium isolate a44c304e-2480-4604-92e3-6035b9b042d9 genome assembly, chromosome: 1 blastn 2649 176 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
27773195 27773195 PRJNA550047_P_NODE_358264_length_281_cov_18.802885_g356293_i0 PRJNA550047 358264 281 18.802885 52.83610685 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 42.7 0.0495   NR MFI5200892.1 2447898 g356293 i0 38.6 0.469750889679715 44 26 47 1 254 123 146 188 MFI5200892.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 132 42.7 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31974647 31974647 PRJNA550047_P_NODE_321838_length_294_cov_6.669683_g319868_i0 PRJNA550047 321838 294 6.669683 19.60886802 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 159 8.38e-43   NR HVK39467.1 2447898 g319868 i0 77.6 1.09183673469388 107 14 99 2 291 1 973 1079 HVK39467.1 choice-of-anchor D domain-containing protein [Candidatus Kapaibacterium sp.] diamond 321 159 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32227846 32227846 PRJNA550047_P_NODE_110778_length_345_cov_7.500000_g108818_i0 PRJNA550047 110778 345 7.5 25.875 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 94.7 6.0100000000000005e-21   NR HVK36930.1 2447898 g108818 i0 88 0.434782608695652 50 6 43.5 0 2 151 188 237 HVK36930.1 ABC transporter permease [Candidatus Kapaibacterium sp.] diamond 150 94.7 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32716405 32716405 PRJNA550047_P_NODE_405420_length_263_cov_3.952632_g403448_i0 PRJNA550047 405420 263 3.952632 10.39542216 Bacteria 2 Bacteria Bacteria 77.8 1.66e-14   NR HVK58662.1 2447898 g403448 i0 56.7 1.20912547528517 60 26 68.4 0 181 2 9 68 HVK58662.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 318 77.8 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;