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contig_metadata

26 rows where bioproject = "PRJNA550047", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 26 ✖

tax_clade 1

  • Amoebozoa · 26 ✖

bioproject 1

  • PRJNA550047 · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
513633 513633 PRJNA550047_P_NODE_215621_length_301_cov_17.135965_g213652_i0 PRJNA550047 215621 301 17.135965 51.57925465 Sappinia pedata 472956 Discosea other_Eukaryota 279 1.18e-70   NTclustered gi|940520931|gb|KR816830.1| 472956 g213652 i0 100 13.8039867109635 151 0 100 0 151 301 976 1126 Sappinia pedata strain sd-sayn 18S ribosomal RNA gene, partial sequence blastn 4155 279 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Sappinia Sappinia pedata
1792301 1792301 PRJNA550047_P_NODE_457802_length_244_cov_13.549708_g455829_i0 PRJNA550047 457802 244 13.549708 33.06128752 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 178 3.48e-40   NTclustered gi|470516190|ref|XM_004352990.1| 1257118 g455829 i0 95.495 0.454918032786885 111 5 45 0 120 230 1472 1362 Acanthamoeba castellanii str. Neff transporter, cation channel family (ACA1_071360), partial mRNA blastn 111 178 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3065625 3065625 PRJNA550047_P_NODE_30123_length_420_cov_21.051873_g28194_i0 PRJNA550047 30123 420 21.051873 88.4178666 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 632 1.1399999999999998e-176   NTclustered gi|300078498|gb|GU001160.1| 5755 g28194 i0 93.692 14.9309523809524 428 18 100 8 1 420 5498 5924 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6271 632 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7500616 7500616 PRJNA550047_P_NODE_82786_length_345_cov_10.323529_g80826_i0 PRJNA550047 82786 345 10.323529 35.61617505 Sappinia 343528 Discosea other_Eukaryota 279 1.38e-70   NTclustered gi|157673614|gb|EU004594.1| 472956 g80826 i0 100 39.4811594202899 151 0 88 0 195 345 1942 2092 Sappinia pedata strain NZ05-11L-1 small subunit ribosomal RNA gene, partial sequence blastn 13621 279 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Sappinia Sappinia pedata
10721673 10721673 PRJNA550047_P_NODE_528149_length_221_cov_6.108108_g526176_i0 PRJNA550047 528149 221 6.108108 13.49891868 Vannella sp. ECH30 1215635 Discosea other_Eukaryota 398 2.1799999999999995e-106   NTclustered gi|399764220|gb|JQ271731.1| 1215635 g526176 i0 99.095 98.9773755656109 221 2 100 0 1 221 1827 1607 Vannella sp. ECH30 18S ribosomal RNA gene, partial sequence blastn 21874 398 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ECH30
10722108 10722108 PRJNA550047_P_NODE_564729_length_209_cov_4.367647_g562756_i0 PRJNA550047 564729 209 4.367647 9.12838223 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 285 1.6599999999999998e-72   NTclustered gi|470477061|ref|XM_004342276.1| 1257118 g562756 i0 97.041 0.808612440191388 169 5 81 0 41 209 235 67 Acanthamoeba castellanii str. Neff general stress protein 26 (ACA1_116880), partial mRNA blastn 169 285 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11994542 11994542 PRJNA550047_P_NODE_374270_length_275_cov_7.039604_g372298_i0 PRJNA550047 374270 275 7.039604 19.358911 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 230 1.0899999999999995e-55   NTclustered gi|300078498|gb|GU001160.1| 5755 g372298 i0 82.456 41.1854545454545 285 28 99 11 3 275 7787 7513 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11326 230 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11996355 11996355 PRJNA550047_P_NODE_520450_length_223_cov_17.040000_g518477_i0 PRJNA550047 520450 223 17.04 37.9992 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 357 3.75e-94   NTclustered gi|300078498|gb|GU001160.1| 5755 g518477 i0 95.516 1.12556053811659 223 10 100 0 1 223 7817 7595 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 251 357 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13267556 13267556 PRJNA550047_P_NODE_206031_length_326_cov_40.766798_g204063_i0 PRJNA550047 206031 326 40.766798 132.89976148 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 132 3.83e-26   NTclustered gi|300078498|gb|GU001160.1| 5755 g204063 i0 88.288 1.34049079754601 111 12 34 1 4 113 6778 6888 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 437 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13268376 13268376 PRJNA550047_P_NODE_282311_length_298_cov_35.248889_g280342_i0 PRJNA550047 282311 298 35.248889 105.04168922 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.028   NTclustered gi|470391503|ref|XM_004334629.1| 1257118 g280342 i0 100 0.0939597315436242 28 0 9 0 100 127 678 705 Acanthamoeba castellanii str. Neff RhoGEF domain containing protein (ACA1_091740), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13874350 13874350 PRJNA550047_P_NODE_206371_length_325_cov_10.230159_g204403_i0 PRJNA550047 206371 325 10.230159 33.24801675 Acanthamoeba 5754 Discosea other_Eukaryota 573 5.269999999999998e-159   NTclustered gi|507399|gb|U07403.1|ACU07403 5755 g204403 i0 98.462 100.483076923077 325 5 100 0 1 325 724 1048 Acanthamoeba castellanii CDC:0786:V042 18S rRNA gene blastn 32657 573 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14545090 14545090 PRJNA550047_P_NODE_41612_length_368_cov_22.820339_g39657_i0 PRJNA550047 41612 368 22.820339 83.97884752 Sappinia pedata 472956 Discosea other_Eukaryota 669 0   NTclustered gi|940520931|gb|KR816830.1| 472956 g39657 i0 99.458 68.0896739130435 369 1 100 1 1 368 518 150 Sappinia pedata strain sd-sayn 18S ribosomal RNA gene, partial sequence blastn 25057 669 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Sappinia Sappinia pedata
14547304 14547304 PRJNA550047_P_NODE_596032_length_199_cov_9.015873_g594059_i0 PRJNA550047 596032 199 9.015873 17.94158727 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 320 4.29e-83   NTclustered gi|470526584|ref|XM_004356730.1| 1257118 g594059 i0 95.939 0.989949748743719 197 8 99 0 1 197 2568 2764 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_175580), partial mRNA blastn 197 320 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17093683 17093683 PRJNA550047_P_NODE_414994_length_259_cov_8.698925_g413022_i0 PRJNA550047 414994 259 8.698925 22.53021575 Vannella sp. ECH30 1215635 Discosea other_Eukaryota 455 1.54e-123   NTclustered gi|399764220|gb|JQ271731.1| 1215635 g413022 i0 98.45 90.3397683397683 258 4 99 0 1 258 673 930 Vannella sp. ECH30 18S ribosomal RNA gene, partial sequence blastn 23398 455 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ECH30
18366370 18366370 PRJNA550047_P_NODE_300855_length_297_cov_7.428571_g298886_i0 PRJNA550047 300855 297 7.428571 22.06285587 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 115 3.47e-21   NTclustered gi|470516241|ref|XM_004352999.1| 1257118 g298886 i0 94.595 0.249158249158249 74 4 25 0 224 297 1 74 Acanthamoeba castellanii str. Neff glycosyl transferase (ACA1_071450), partial mRNA blastn 74 115 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18367109 18367109 PRJNA550047_P_NODE_360535_length_280_cov_32.821256_g358564_i0 PRJNA550047 360535 280 32.821256 91.8995168 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 398 2.8799999999999993e-106   NTclustered gi|300078498|gb|GU001160.1| 5755 g358564 i0 91.864 3.43928571428571 295 9 100 13 1 280 6143 6437 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 963 398 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19639888 19639888 PRJNA550047_P_NODE_206316_length_325_cov_14.765873_g204348_i0 PRJNA550047 206316 325 14.765873 47.98908725 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 556 5.31e-154   NTclustered gi|300078498|gb|GU001160.1| 5755 g204348 i0 97.554 23.7723076923077 327 4 99 4 1 324 6744 7069 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7726 556 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19643276 19643276 PRJNA550047_P_NODE_482296_length_236_cov_11.374233_g480323_i0 PRJNA550047 482296 236 11.374233 26.84318988 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 111 3.44e-20   NTclustered gi|470435439|ref|XM_004338726.1| 1257118 g480323 i0 95.652 0.48728813559322 69 3 49 0 127 195 222 154 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_382290), partial mRNA blastn 115 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22192708 22192708 PRJNA550047_P_NODE_390878_length_268_cov_13.610256_g388906_i0 PRJNA550047 390878 268 13.610256 36.47548608 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 141 5.09e-29   NTclustered gi|470526364|ref|XM_004356692.1| 1257118 g388906 i0 97.561 0.593283582089552 82 2 59 0 156 237 2453 2372 Acanthamoeba castellanii str. Neff 6phosphofructokinase (ACA1_175190), partial mRNA blastn 159 141 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22195047 22195047 PRJNA550047_P_NODE_588498_length_201_cov_13.570312_g586525_i0 PRJNA550047 588498 201 13.570312 27.27632712 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 329 7.21e-86   NTclustered gi|300078498|gb|GU001160.1| 5755 g586525 i0 96.517 28.8805970149254 201 3 100 3 1 201 5652 5456 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5805 329 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24739747 24739747 PRJNA550047_P_NODE_210160_length_309_cov_3.330508_g208192_i0 PRJNA550047 210160 309 3.330508 10.29126972 Vannella septentrionalis 197531 Discosea other_Eukaryota 396 1.16e-105   NTclustered gi|300078499|gb|GU001161.1| 197531 g208192 i0 89.905 64.8640776699029 317 19 99 10 1 307 3805 3492 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20043 396 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
24742416 24742416 PRJNA550047_P_NODE_427420_length_254_cov_21.574586_g425448_i0 PRJNA550047 427420 254 21.574586 54.79944844 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 171 6.1e-38   NTclustered gi|300078498|gb|GU001160.1| 5755 g425448 i0 79.767 1.01181102362205 257 34 100 13 1 254 5672 5913 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 257 171 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28341474 28341474 PRJNA550047_P_NODE_594386_length_199_cov_20.444444_g592413_i0 PRJNA550047 594386 199 20.444444 40.68444356 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67.4 4.25e-11   NR XP_004338784.1 1257118 g592413 i0 46.2 0.979899497487437 65 35 98 0 5 199 670 734 XP_004338784.1 uncharacterized protein ACA1_382400 [Acanthamoeba castellanii str. Neff] diamond 195 67.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29667004 29667004 PRJNA550047_P_NODE_121790_length_345_cov_6.636029_g119830_i0 PRJNA550047 121790 345 6.636029 22.89430005 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.4 2.08e-4   NR XP_004349650.1 1257118 g119830 i0 55.8 0.373913043478261 43 18 37.4 1 132 4 208 249 XP_004349650.1 RhoGAP domain containing protein [Acanthamoeba castellanii str. Neff] diamond 129 50.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29857028 29857028 PRJNA550047_P_NODE_70831_length_345_cov_12.216912_g68871_i0 PRJNA550047 70831 345 12.216912 42.1483464 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 82.4 1.51e-15   NR XP_004352827.1 1257118 g68871 i0 42.4 1.14782608695652 132 58 99.1 2 3 344 427 558 XP_004352827.1 efflux ABC transporter, permease domain containing protein [Acanthamoeba castellanii str. Neff] diamond 396 82.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32890575 32890575 PRJNA550047_P_NODE_50440_length_345_cov_21.944853_g48480_i0 PRJNA550047 50440 345 21.944853 75.70974285 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47 0.00366   NR XP_004339511.1 1257118 g48480 i0 66.7 0.234782608695652 27 9 23.5 0 299 219 10 36 XP_004339511.1 vacuolar fusion protein ccz1 family protein [Acanthamoeba castellanii str. Neff] diamond 81 47 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;