RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA549880" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA549880 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15814736 15814736 PRJNA549880_P_NODE_4353_length_362_cov_1.273356_g4260_i0 PRJNA549880 4353 362 1.273356 4.60954872 Opisthokonta 33154 Nemertea other_Eukaryota 92 8.27e-19   NR XP_064639880.1 88925 g4260 i0 72.9 5.37016574585635 59 14 48.9 1 206 30 1641 1697 XP_064639880.1 chromodomain-helicase-DNA-binding protein 8-like isoform X1 [Lineus longissimus] diamond 1944 92.4 0.995670995670996 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
28056915 28056915 PRJNA549880_P_NODE_11245_length_250_cov_0.870056_g11152_i0 PRJNA549880 11245 250 0.870056 2.17514 Lineus longissimus 88925 Nemertea other_Eukaryota 47.8 3.48e-4   NR XP_064636629.1 88925 g11152 i0 50 0.504 42 21 50.4 0 126 1 104 145 XP_064636629.1 gem-associated protein 6-like [Lineus longissimus] diamond 126 47.8 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;