contig_metadata
6 rows where bioproject = "PRJNA549880" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 511806 | 511806 | PRJNA549880_P_NODE_15861_length_235_cov_2.450617_g15768_i0 | PRJNA549880 | 15861 | 235 | 2.450617 | 5.75894995 | Polyangium aurulentum | 2567896 | Bacteria | Bacteria | 311 | 3.15e-80 | NTclustered | gi|2235996827|gb|CP079217.1| | 2567896 | g15768 | i0 | 92.237 | 0.931914893617021 | 219 | 17 | 93 | 0 | 4 | 222 | 2732294 | 2732076 | Polyangium aurulentum strain SDU3-1 chromosome, complete genome | blastn | 219 | 311 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 1787330 | 1787330 | PRJNA549880_P_NODE_15242_length_242_cov_0.911243_g15149_i0 | PRJNA549880 | 15242 | 242 | 0.911243 | 2.20520806 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 94.7 | 9.55e-21 | NR | MEZ0313284.1 | 2818507 | g15149 | i0 | 75 | 1.61157024793388 | 64 | 15 | 78.1 | 1 | 190 | 2 | 1 | 64 | MEZ0313284.1 type II secretion system F family protein [Myxococcota bacterium] | diamond | 390 | 94.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 15147802 | 15147802 | PRJNA549880_P_NODE_7692_length_288_cov_2.530233_g7599_i0 | PRJNA549880 | 7692 | 288 | 2.530233 | 7.28707104 | Minicystis sp. | 1971901 | Bacteria | Bacteria | 126 | 2.2799999999999997e-31 | NR | MFT3770294.1 | 1971901 | g7599 | i0 | 64 | 1.90625 | 86 | 31 | 89.6 | 0 | 260 | 3 | 79 | 164 | MFT3770294.1 nucleotide-binding protein [Minicystis sp.] | diamond | 549 | 126 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis sp. | |||
| 27615174 | 27615174 | PRJNA549880_P_NODE_5004_length_343_cov_1.140741_g4911_i0 | PRJNA549880 | 5004 | 343 | 1.140741 | 3.91274163 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 60.5 | 5.64e-8 | NR | HEY3451124.1 | 2026763 | g4911 | i0 | 51.9 | 1.82798833819242 | 52 | 25 | 45.5 | 0 | 4 | 159 | 195 | 246 | HEY3451124.1 thioredoxin-disulfide reductase [Myxococcales bacterium] | diamond | 627 | 60.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 27930756 | 27930756 | PRJNA549880_P_NODE_11745_length_249_cov_0.875000_g11652_i0 | PRJNA549880 | 11745 | 249 | 0.875 | 2.17875 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 149 | 8.53e-40 | NR | NOU31950.1 | 2268199 | g11652 | i0 | 91.5 | 0.987951807228916 | 82 | 7 | 98.8 | 0 | 3 | 248 | 77 | 158 | NOU31950.1 hypothetical protein [Polyangiaceae bacterium] | diamond | 246 | 149 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 31974505 | 31974505 | PRJNA549880_P_NODE_12358_length_247_cov_1.396552_g12265_i0 | PRJNA549880 | 12358 | 247 | 1.396552 | 3.44948344 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 105 | 8.870000000000001e-27 | NR | MBK9001865.1 | 2026763 | g12265 | i0 | 65.9 | 0.995951417004049 | 82 | 26 | 97.2 | 1 | 5 | 244 | 27 | 108 | MBK9001865.1 hypothetical protein [Myxococcales bacterium] | diamond | 246 | 105 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;