RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA549880" and tax_phylum = "Entoprocta"

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tax_superkingdom 1

tax_phylum 1

  • Entoprocta · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA549880 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30235900 30235900 PRJNA549880_P_NODE_6352_length_313_cov_1.779167_g6259_i0 PRJNA549880 6352 313 1.779167 5.56879271 Barentsia elongata 478378 Entoprocta other_Eukaryota 79.7 9.53e-17   NR ABW90411.1 478378 g6259 i0 72.5 15.7380191693291 102 26 97.8 1 3 308 14 113 ABW90411.1 putative ribosomal protein P2 [Barentsia elongata] diamond 4926 80.1 0.995006242197254 Eukaryota Opisthokonta Metazoa Entoprocta     Barentsiidae Barentsia Barentsia elongata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;