RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA549880" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA549880 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27330913 27330913 PRJNA549880_P_NODE_11583_length_249_cov_0.875000_g11490_i0 PRJNA549880 11583 249 0.875 2.17875 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 143 1.4299999999999998e-37   NR MDP3509630.1 2052166 g11490 i0 92.6 0.975903614457831 81 6 97.6 0 244 2 219 299 MDP3509630.1 TerD family protein [Candidatus Melainabacteria bacterium] diamond 243 143 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
27773076 27773076 PRJNA549880_P_NODE_14244_length_244_cov_0.900585_g14151_i0 PRJNA549880 14244 244 0.900585 2.1974274 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 134 8.23e-37   NR MFA7336086.1 2364082 g14151 i0 91.3 0.983606557377049 80 7 98.4 0 3 242 24 103 MFA7336086.1 SRPBCC family protein [Candidatus Obscuribacterales bacterium] diamond 240 134 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
28056920 28056920 PRJNA549880_P_NODE_9705_length_260_cov_1.524064_g9612_i0 PRJNA549880 9705 260 1.524064 3.9625664 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 54.3 3.08e-6   NR HEY9870685.1 2364082 g9612 i0 56.8 0.507692307692308 44 19 50.8 0 260 129 1 44 HEY9870685.1 tetratricopeptide repeat protein [Candidatus Obscuribacterales bacterium] diamond 132 54.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
32638333 32638333 PRJNA549880_P_NODE_9720_length_260_cov_1.278075_g9627_i0 PRJNA549880 9720 260 1.278075 3.322995 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 134 3.2e-35   NR MFA6213298.1 2364082 g9627 i0 82.6 0.992307692307692 86 14 99.2 1 259 2 325 409 MFA6213298.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 258 134 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;