contig_metadata
14 rows where bioproject = "PRJNA549880", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1787267 | 1787267 | PRJNA549880_P_NODE_12642_length_247_cov_0.885057_g12549_i0 | PRJNA549880 | 12642 | 247 | 0.885057 | 2.18609079 | Bdellovibrio | 958 | Bacteria | Bacteria | 151 | 1.44e-43 | NR | MBO9668818.1 | 28201 | g12549 | i0 | 85.2 | 4.91902834008097 | 81 | 12 | 98.4 | 0 | 2 | 244 | 118 | 198 | MBO9668818.1 nicotinate (nicotinamide) nucleotide adenylyltransferase [Bdellovibrio sp.] | diamond | 1215 | 152 | 0.993421052631579 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 8164714 | 8164714 | PRJNA549880_P_NODE_15307_length_242_cov_0.911243_g15214_i0 | PRJNA549880 | 15307 | 242 | 0.911243 | 2.20520806 | Bdellovibrio | 958 | Bacteria | Bacteria | 119 | 9.87e-30 | NR | HWU44735.1 | 28201 | g15214 | i0 | 77.9 | 1.69834710743802 | 68 | 15 | 84.3 | 0 | 3 | 206 | 357 | 424 | HWU44735.1 chloride channel protein [Bdellovibrio sp.] | diamond | 411 | 119 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 8164773 | 8164773 | PRJNA549880_P_NODE_4267_length_364_cov_2.192440_g4174_i0 | PRJNA549880 | 4267 | 364 | 2.19244 | 7.9804816 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 407 | 6.399999999999999e-109 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g4174 | i0 | 87.052 | 158.445054945055 | 363 | 43 | 99 | 4 | 5 | 364 | 1292345 | 1292706 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 57674 | 407 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 10715910 | 10715910 | PRJNA549880_P_NODE_10489_length_251_cov_0.865169_g10396_i0 | PRJNA549880 | 10489 | 251 | 0.865169 | 2.17157419 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 134 | 6.32e-36 | NR | MES2856485.1 | 3034175 | g10396 | i0 | 83.1 | 6.95617529880478 | 83 | 13 | 98 | 1 | 3 | 248 | 63 | 145 | MES2856485.1 aspartate-semialdehyde dehydrogenase [Bdellovibrionota bacterium] | diamond | 1746 | 134 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 18363350 | 18363350 | PRJNA549880_P_NODE_10895_length_250_cov_0.870056_g10802_i0 | PRJNA549880 | 10895 | 250 | 0.870056 | 2.17514 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 187 | 5.949999999999998e-43 | NTclustered | gi|2800914199|gb|CP168971.1| | 959 | g10802 | i0 | 80.408 | 1.328 | 245 | 48 | 98 | 0 | 5 | 249 | 1520821 | 1520577 | Bdellovibrio bacteriovorus strain Bd16 chromosome, complete genome | blastn | 332 | 187 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 26602898 | 26602898 | PRJNA549880_P_NODE_9501_length_263_cov_1.610526_g9408_i0 | PRJNA549880 | 9501 | 263 | 1.610526 | 4.23568338 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 85.5 | 3.31e-17 | NR | WP_415061941.1 | 28201 | g9408 | i0 | 50.6 | 0.901140684410646 | 79 | 39 | 90.1 | 0 | 26 | 262 | 255 | 333 | WP_415061941.1 hypothetical protein [Bdellovibrio sp.] | diamond | 237 | 85.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 27046368 | 27046368 | PRJNA549880_P_NODE_13042_length_246_cov_0.890173_g12949_i0 | PRJNA549880 | 13042 | 246 | 0.890173 | 2.18982558 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 155 | 4.03e-44 | NR | MAV92299.1 | 2026715 | g12949 | i0 | 86.6 | 1 | 82 | 9 | 100 | 1 | 1 | 246 | 219 | 298 | MAV92299.1 zinc carboxypeptidase [Pseudobdellovibrionaceae bacterium] | diamond | 246 | 155 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 27250754 | 27250754 | PRJNA549880_P_NODE_15923_length_226_cov_2.627451_g15830_i0 | PRJNA549880 | 15923 | 226 | 2.627451 | 5.93803926 | Bdellovibrio | 958 | Bacteria | Bacteria | 103 | 5.46e-24 | NR | BFD63541.1 | 3113894 | g15830 | i0 | 80.3 | 1.61946902654867 | 61 | 12 | 81 | 0 | 224 | 42 | 377 | 437 | BFD63541.1 serine hydrolase [Bdellovibrio sp. HM001] | diamond | 366 | 103 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HM001 | ||
| 27930757 | 27930757 | PRJNA549880_P_NODE_12485_length_247_cov_0.885057_g12392_i0 | PRJNA549880 | 12485 | 247 | 0.885057 | 2.18609079 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 65.5 | 3.12e-10 | NR | WP_408097510.1 | 3383025 | g12392 | i0 | 61 | 1.02024291497976 | 41 | 16 | 49.8 | 0 | 2 | 124 | 288 | 328 | WP_408097510.1 S66 peptidase family protein [Peredibacter sp. HCB2-198] | diamond | 252 | 65.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 30077778 | 30077778 | PRJNA549880_P_NODE_12432_length_247_cov_0.885057_g12339_i0 | PRJNA549880 | 12432 | 247 | 0.885057 | 2.18609079 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 84 | 1.09e-16 | NR | MBS1971144.1 | 2053517 | g12339 | i0 | 88.6 | 1.61538461538462 | 44 | 5 | 53.4 | 0 | 2 | 133 | 231 | 274 | MBS1971144.1 TldD/PmbA family protein [Bdellovibrionales bacterium] | diamond | 399 | 84 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30425922 | 30425922 | PRJNA549880_P_NODE_8593_length_277_cov_1.269608_g8500_i0 | PRJNA549880 | 8593 | 277 | 1.269608 | 3.51681416 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 141 | 1.7e-37 | NR | MBX3018986.1 | 2026715 | g8500 | i0 | 69.6 | 0.996389891696751 | 92 | 28 | 99.6 | 0 | 1 | 276 | 207 | 298 | MBX3018986.1 DUF4340 domain-containing protein [Pseudobdellovibrionaceae bacterium] | diamond | 276 | 141 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 30899546 | 30899546 | PRJNA549880_P_NODE_8614_length_277_cov_0.975490_g8521_i0 | PRJNA549880 | 8614 | 277 | 0.97549 | 2.7021073 | Micavibrio sp. | 2024841 | Bacteria | Bacteria | 129 | 2.0499999999999998e-34 | NR | HEY8190091.1 | 2024841 | g8521 | i0 | 71.7 | 0.996389891696751 | 92 | 26 | 99.6 | 0 | 276 | 1 | 96 | 187 | HEY8190091.1 sulfite exporter TauE/SafE family protein [Micavibrio sp.] | diamond | 276 | 129 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio sp. | ||
| 32733262 | 32733262 | PRJNA549880_P_NODE_8340_length_280_cov_1.285024_g8247_i0 | PRJNA549880 | 8340 | 280 | 1.285024 | 3.5980672 | Bdellovibrio sp. 22V | 3044166 | Bacteria | Bacteria | 143 | 1.7899999999999998e-37 | NR | WP_284607577.1 | 3044166 | g8247 | i0 | 69.9 | 2.96785714285714 | 93 | 28 | 99.6 | 0 | 280 | 2 | 483 | 575 | WP_284607577.1 penicillin-binding transpeptidase domain-containing protein [Bdellovibrio sp. 22V] | diamond | 831 | 143 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. 22V | ||
| 32890363 | 32890363 | PRJNA549880_P_NODE_11940_length_248_cov_0.880000_g11847_i0 | PRJNA549880 | 11940 | 248 | 0.88 | 2.1824 | Bdellovibrio svalbardensis | 2972972 | Bacteria | Bacteria | 99.4 | 4.16e-22 | NR | WP_277576537.1 | 2972972 | g11847 | i0 | 61.3 | 0.967741935483871 | 80 | 31 | 96.8 | 0 | 8 | 247 | 74 | 153 | WP_277576537.1 methyl-accepting chemotaxis protein [Bdellovibrio svalbardensis] | diamond | 240 | 99.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio svalbardensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;