RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA549880", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA549880 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10716149 10716149 PRJNA549880_P_NODE_8149_length_282_cov_2.229665_g8056_i0 PRJNA549880 8149 282 2.229665 6.2876553 Diadema antillarum 105358 Echinodermata other_Eukaryota 135 4.06e-38   NR XP_071509954.1 105358 g8056 i0 68.5 4.74468085106383 89 28 94.7 0 269 3 9 97 XP_071509954.1 large ribosomal subunit protein uL6-like [Diadema antillarum] diamond 1338 135 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
12598590 12598590 PRJNA549880_P_NODE_10090_length_254_cov_1.701657_g9997_i0 PRJNA549880 10090 254 1.701657 4.32220878 Echinodermata 7586 Echinodermata other_Eukaryota 183 7.84e-42   NTclustered gi|1834282072|ref|XM_033782857.1| 7604 g9997 i0 82.609 32.6456692913386 207 36 81 0 30 236 326 120 PREDICTED: Asterias rubens 60S ribosomal protein L12-like (LOC117299337), mRNA blastn 8292 183 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;