RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA549880", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA549880 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1787430 1787430 PRJNA549880_P_NODE_6062_length_319_cov_4.256098_g5969_i0 PRJNA549880 6062 319 4.256098 13.57695262 Basidiobolus meristosporus CBS 931.73 1314790 Fungi Fungi 152 1.32e-45   NR ORX95554.1 1314790 g5969 i0 74.8 2.90595611285266 103 26 96.9 0 9 317 1 103 ORX95554.1 60S ribosomal protein L34-B [Basidiobolus meristosporus CBS 931.73] diamond 927 152 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus
31120252 31120252 PRJNA549880_P_NODE_11095_length_250_cov_0.870056_g11002_i0 PRJNA549880 11095 250 0.870056 2.17514 Dimargaris cristalligena 215637 Fungi Fungi 98.2 2.3599999999999998e-23   NR KAJ1984424.1 215637 g11002 i0 65.9 0.984 82 28 98.4 0 1 246 121 202 KAJ1984424.1 60S ribosomal protein L16A [Dimargaris cristalligena] diamond 246 98.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dimargaris Dimargaris cristalligena

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;