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contig_metadata

12 rows where bioproject = "PRJNA546018" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 12 ✖

bioproject 1

  • PRJNA546018 · 12 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2394818 2394818 PRJNA546018_S_NODE_9002_length_583_cov_2.457854_g8686_i0 PRJNA546018 9002 583 2.457854 14.32928882 Nitrosopumilales archaeon 2026768 Archaea Archaea 138 6.67e-39   NR RPJ29686.1 2026768 g8686 i0 98.6 0.355060034305317 69 1 35.5 0 551 345 18 86 RPJ29686.1 MAG: hypothetical protein EHM25_08605 [Nitrosopumilales archaeon] diamond 207 138 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales     Nitrosopumilales archaeon
28056900 28056900 PRJNA546018_S_NODE_29365_length_290_cov_3.794760_g29040_i0 PRJNA546018 29365 290 3.79476 11.004804 Thermoproteota archaeon 2056631 Archaea Archaea 128 2.2999999999999998e-32   NR MEM3368523.1 2056631 g29040 i0 94.2 0.713793103448276 69 4 71.4 0 266 60 495 563 MEM3368523.1 hypothetical protein [Thermoproteota archaeon] diamond 207 128 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
28499241 28499241 PRJNA546018_S_NODE_46547_length_223_cov_3.746914_g46222_i0 PRJNA546018 46547 223 3.746914 8.35561822 Thermoproteota archaeon 2056631 Archaea Archaea 126 8.89e-32   NR MEM3368643.1 2056631 g46222 i0 95.5 0.887892376681614 66 3 88.8 0 25 222 791 856 MEM3368643.1 hypothetical protein [Thermoproteota archaeon] diamond 198 126 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
28892645 28892645 PRJNA546018_S_NODE_45868_length_225_cov_3.896341_g45543_i0 PRJNA546018 45868 225 3.896341 8.76676725 Nanobdellati 1783276 Archaea Archaea 132 1.2e-33   NR MCG2720205.1 2026764 g45543 i0 89.3 4 75 8 100 0 1 225 387 461 MCG2720205.1 Eco57I restriction-modification methylase domain-containing protein [Nanoarchaeota archaeon] diamond 900 132 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
30678031 30678031 PRJNA546018_S_NODE_23013_length_334_cov_2.732601_g22688_i0 PRJNA546018 23013 334 2.732601 9.12688734 Ignisphaera sp. 2268142 Archaea Archaea 61.6 1.1e-8   NR MCI4435342.1 2268142 g22688 i0 32.3 1.44610778443114 96 56 85.3 3 12 296 69 156 MCI4435342.1 hypothetical protein [Ignisphaera sp.] diamond 483 61.6 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Ignisphaera Ignisphaera sp.
30867713 30867713 PRJNA546018_S_NODE_20934_length_352_cov_6.635739_g20609_i0 PRJNA546018 20934 352 6.635739 23.35780128 archaeon 1906665 Archaea Archaea 48.9 7.98e-5   NR MDP2437058.1 1906665 g20609 i0 65.5 1.29545454545455 29 10 24.7 0 230 316 55 83 MDP2437058.1 hypothetical protein [archaeon] diamond 456 48.9 1 Archaea               archaeon
31310131 31310131 PRJNA546018_S_NODE_17915_length_386_cov_5.289231_g17590_i0 PRJNA546018 17915 386 5.289231 20.41643166 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 83.2 1.32e-15   NR MCX8150022.1 2026714 g17590 i0 43.8 0.940414507772021 121 66 93.3 2 22 381 239 358 MCX8150022.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 363 83.2 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
31595146 31595146 PRJNA546018_S_NODE_54476_length_206_cov_2.358621_g54151_i0 PRJNA546018 54476 206 2.358621 4.85875926 Nitrosopumilales archaeon 2026768 Archaea Archaea 136 2.1e-35   NR RPJ31358.1 2026768 g54151 i0 98.5 5.85436893203883 67 1 97.6 0 205 5 442 508 RPJ31358.1 MAG: DNA-directed DNA polymerase I [Nitrosopumilales archaeon] diamond 1206 136 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales     Nitrosopumilales archaeon
31752976 31752976 PRJNA546018_S_NODE_15677_length_417_cov_18.485955_g15352_i0 PRJNA546018 15677 417 18.485955 77.08643235 archaeon 1906665 Archaea Archaea 132 1.14e-34   NR RYG65852.1 1906665 g15352 i0 72.2 0.568345323741007 79 22 56.8 0 395 159 232 310 RYG65852.1 MAG: hypothetical protein EON64_11065 [archaeon] diamond 237 132 1 Archaea               archaeon
31847873 31847873 PRJNA546018_S_NODE_53877_length_207_cov_1.965753_g53552_i0 PRJNA546018 53877 207 1.965753 4.06910871 Nitrososphaerales archaeon 2268197 Archaea Archaea 66.6 3.37e-11   NR MDP7658232.1 2268197 g53552 i0 41.2 0.985507246376812 68 40 98.6 0 205 2 139 206 MDP7658232.1 molecular chaperone TorD family protein [Nitrososphaerales archaeon] diamond 204 66.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
32069384 32069384 PRJNA546018_S_NODE_7458_length_650_cov_6.190153_g7160_i0 PRJNA546018 7458 650 6.190153 40.2359945 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 183 1.87e-51   NR HEX9430277.1 3045160 g7160 i0 47.8 0.955384615384615 207 79 92.8 5 24 626 122 305 HEX9430277.1 DNA polymerase A family protein [Candidatus Bathyarchaeia archaeon] diamond 621 183 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
32385844 32385844 PRJNA546018_S_NODE_13259_length_462_cov_11.738155_g12935_i0 PRJNA546018 13259 462 11.738155 54.2302761 archaeon 1906665 Archaea Archaea 82.8 2.11e-17   NR RYH28346.1 1906665 g12935 i0 49.4 1.22727272727273 89 45 57.8 0 80 346 10 98 RYH28346.1 MAG: hypothetical protein EON65_12530 [archaeon] diamond 567 82.8 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;