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contig_metadata

20 rows where bioproject = "PRJNA546018" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA546018 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5614966 5614966 PRJNA546018_S_NODE_44845_length_228_cov_3.263473_g44520_i0 PRJNA546018 44845 228 3.263473 7.44071844 Brachionus koreanus 1199090 Rotifera other_Eukaryota 104 5.53e-18   NTclustered gi|477541861|gb|KC603850.1| 1199090 g44520 i0 76.303 32.9342105263158 211 40 90 10 23 228 6821 7026 Brachionus sp. 'koreanus' chromosome II mitochondrion, complete sequence blastn 7509 104 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus koreanus
8163559 8163559 PRJNA546018_S_NODE_20047_length_361_cov_157.393333_g19722_i0 PRJNA546018 20047 361 157.393333 568.18993213 Brachionus urceolaris 204736 Rotifera other_Eukaryota 527 4.659999999999999e-145   NTclustered gi|72153738|gb|DQ089740.1| 204736 g19722 i0 93.75 62.3573407202216 352 20 97 2 1 351 1751 2101 Brachionus urceolaris 28S ribosomal RNA gene, partial sequence blastn 22511 527 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris
9439292 9439292 PRJNA546018_S_NODE_31488_length_279_cov_1.931193_g31163_i0 PRJNA546018 31488 279 1.931193 5.38802847 Philodina citrina 468664 Rotifera other_Eukaryota 390 4.7899999999999996e-104   NTclustered gi|407227484|emb|FR856884.1| 468664 g31163 i0 93.511 4.7168458781362 262 17 94 0 3 264 2376 2115 Philodina citrina complete mitochondrial genome blastn 1316 390 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
9439680 9439680 PRJNA546018_S_NODE_54488_length_206_cov_2.282759_g54163_i0 PRJNA546018 54488 206 2.282759 4.70248354 Adineta vaga 104782 Rotifera other_Eukaryota 359 9.47e-95   NTclustered gi|72153731|gb|DQ089739.1| 104782 g54163 i0 98.058 33.3349514563107 206 4 100 0 1 206 2435 2640 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 6867 359 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
14540188 14540188 PRJNA546018_S_NODE_59612_length_194_cov_2.413534_g59287_i0 PRJNA546018 59612 194 2.413534 4.68225596 Cephalodella gibba 231616 Rotifera other_Eukaryota 274 3.28e-69   NTclustered gi|37788188|gb|AY218141.1| 231616 g59287 i0 93.122 98.701030927835 189 9 95 3 1 185 191 3 Cephalodella gibba 28S ribosomal RNA gene, partial sequence blastn 19148 274 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Notommatidae Cephalodella Cephalodella gibba
17697108 17697108 PRJNA546018_S_NODE_24074_length_325_cov_82.537879_g23749_i0 PRJNA546018 24074 325 82.537879 268.24810675 Ploima 84394 Rotifera other_Eukaryota 457 5.5399999999999986e-124   NTclustered gi|61200802|gb|AY829083.1| 96446 g23749 i0 94.04 90.7876923076923 302 17 93 1 1 302 1722 1422 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 29506 460 0.993478260869565 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
20912702 20912702 PRJNA546018_S_NODE_13757_length_451_cov_7.492308_g13433_i0 PRJNA546018 13757 451 7.492308 33.79030908 Proales similis 360698 Rotifera other_Eukaryota 287 1.1e-72   NTclustered gi|1859640894|gb|MN970216.1| 360698 g13433 i0 80.688 2.09977827050998 378 66 83 6 9 382 12533 12159 Proales similis mitochondrion, complete genome blastn 947 287 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
24736762 24736762 PRJNA546018_S_NODE_21520_length_347_cov_3.139860_g21195_i0 PRJNA546018 21520 347 3.13986 10.8953142 Adineta steineri 433720 Rotifera other_Eukaryota 58.9 4.27e-9   NR CAF1524969.1 433720 g21195 i0 58 0.432276657060519 50 20 42.4 1 123 269 1 50 CAF1524969.1 unnamed protein product, partial [Adineta steineri] diamond 150 58.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
26808056 26808056 PRJNA546018_S_NODE_17101_length_397_cov_6.988095_g16776_i0 PRJNA546018 17101 397 6.988095 27.74273715 Adineta 104781 Rotifera other_Eukaryota 77 2.15e-13   NR CAF0769072.1 249248 g16776 i0 61.7 2.73551637279597 60 23 45.3 0 317 138 1151 1210 CAF0769072.1 unnamed protein product [Adineta ricciae] diamond 1086 77.4 0.994832041343669 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27046344 27046344 PRJNA546018_S_NODE_22582_length_338_cov_2.097473_g22257_i0 PRJNA546018 22582 338 2.097473 7.08945874 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 142 3.789999999999999e-37   NR CAF0855269.1 104777 g22257 i0 67 1.66863905325444 94 31 83.4 0 290 9 1 94 CAF0855269.1 unnamed protein product [Brachionus calyciflorus] diamond 564 142 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
27457325 27457325 PRJNA546018_S_NODE_59703_length_193_cov_3.818182_g59378_i0 PRJNA546018 59703 193 3.818182 7.36909126 Adineta steineri 433720 Rotifera other_Eukaryota 43.9 0.00444   NR CAF4316891.1 433720 g59378 i0 37 0.839378238341969 54 34 83.9 0 184 23 31 84 CAF4316891.1 unnamed protein product, partial [Adineta steineri] diamond 162 43.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
28309699 28309699 PRJNA546018_S_NODE_18506_length_379_cov_1.685535_g18181_i0 PRJNA546018 18506 379 1.685535 6.38817765 Adineta steineri 433720 Rotifera other_Eukaryota 86.3 2.1e-17   NR CAF4154135.1 433720 g18181 i0 72 0.395778364116095 50 14 39.6 0 58 207 216 265 CAF4154135.1 unnamed protein product, partial [Adineta steineri] diamond 150 86.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
28387557 28387557 PRJNA546018_S_NODE_32966_length_271_cov_5.242857_g32641_i0 PRJNA546018 32966 271 5.242857 14.20814247 Brachionus 10194 Rotifera other_Eukaryota 55.5 1.67e-6   NR RNA32985.1 10195 g32641 i0 65.6 0.708487084870849 32 11 35.4 0 107 12 3 34 RNA32985.1 tetratricopeptide repeat 39C-like [Brachionus plicatilis] diamond 192 55.8 0.99462365591397806 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
30014813 30014813 PRJNA546018_S_NODE_26831_length_306_cov_3.077551_g26506_i0 PRJNA546018 26831 306 3.077551 9.41730606 Adineta steineri 433720 Rotifera other_Eukaryota 87.4 1.34e-19   NR CAF4460478.1 433720 g26506 i0 48.9 1.84313725490196 94 42 91.2 2 14 292 22 110 CAF4460478.1 unnamed protein product, partial [Adineta steineri] diamond 564 87.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
30867714 30867714 PRJNA546018_S_NODE_2094_length_1283_cov_9.036007_g1940_i0 PRJNA546018 2094 1283 9.036007 115.93196981 Adineta ricciae 249248 Rotifera other_Eukaryota 209 4.85e-61   NR CAF1079599.1 249248 g1940 i0 43.8 1.17147310989868 256 142 59.9 2 1176 409 4 257 CAF1079599.1 unnamed protein product [Adineta ricciae] diamond 1503 209 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
31166692 31166692 PRJNA546018_S_NODE_9975_length_548_cov_8.063655_g9655_i0 PRJNA546018 9975 548 8.063655 44.1888294 root 1 Root_unresolved Root_unresolved 52 1.74e-4   NR CAF4223994.1 433720 g9655 i0 38.2 0.667883211678832 68 42 37.2 0 252 455 119 186 CAF4223994.1 unnamed protein product, partial [Adineta steineri] diamond 366 52 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
31641276 31641276 PRJNA546018_S_NODE_47536_length_221_cov_1.106250_g47211_i0 PRJNA546018 47536 221 1.10625 2.4448125 root 1 Root_unresolved Root_unresolved 55.1 1.76e-7   NR CAF4463116.1 433720 g47211 i0 66.7 1.47963800904977 33 11 44.8 0 102 200 55 87 CAF4463116.1 unnamed protein product, partial [Adineta steineri] diamond 327 55.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
32069382 32069382 PRJNA546018_S_NODE_57478_length_202_cov_1.078014_g57153_i0 PRJNA546018 57478 202 1.078014 2.17758828 Rotaria sordida 392033 Rotifera other_Eukaryota 50.4 1.89e-5   NR CAF3611765.1 392033 g57153 i0 66.7 0.445544554455446 30 10 44.6 0 42 131 1 30 CAF3611765.1 unnamed protein product, partial [Rotaria sordida] diamond 90 50.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
32101052 32101052 PRJNA546018_S_NODE_30318_length_285_cov_2.361607_g29993_i0 PRJNA546018 30318 285 2.361607 6.73057995 Adineta steineri 433720 Rotifera other_Eukaryota 60.8 3.24e-9   NR CAF4259443.1 433720 g29993 i0 51.9 0.568421052631579 54 24 56.8 1 98 259 49 100 CAF4259443.1 unnamed protein product, partial [Adineta steineri] diamond 162 60.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
32227810 32227810 PRJNA546018_S_NODE_49458_length_216_cov_1.200000_g49133_i0 PRJNA546018 49458 216 1.2 2.592 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 114 2.1600000000000003e-27   NR CAF0813231.1 104777 g49133 i0 84.4 0.888888888888889 64 10 88.9 0 193 2 94 157 CAF0813231.1 unnamed protein product [Brachionus calyciflorus] diamond 192 114 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;