RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA546018", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA546018 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2394818 2394818 PRJNA546018_S_NODE_9002_length_583_cov_2.457854_g8686_i0 PRJNA546018 9002 583 2.457854 14.32928882 Nitrosopumilales archaeon 2026768 Archaea Archaea 138 6.67e-39   NR RPJ29686.1 2026768 g8686 i0 98.6 0.355060034305317 69 1 35.5 0 551 345 18 86 RPJ29686.1 MAG: hypothetical protein EHM25_08605 [Nitrosopumilales archaeon] diamond 207 138 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales     Nitrosopumilales archaeon
31595146 31595146 PRJNA546018_S_NODE_54476_length_206_cov_2.358621_g54151_i0 PRJNA546018 54476 206 2.358621 4.85875926 Nitrosopumilales archaeon 2026768 Archaea Archaea 136 2.1e-35   NR RPJ31358.1 2026768 g54151 i0 98.5 5.85436893203883 67 1 97.6 0 205 5 442 508 RPJ31358.1 MAG: DNA-directed DNA polymerase I [Nitrosopumilales archaeon] diamond 1206 136 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales     Nitrosopumilales archaeon
31847873 31847873 PRJNA546018_S_NODE_53877_length_207_cov_1.965753_g53552_i0 PRJNA546018 53877 207 1.965753 4.06910871 Nitrososphaerales archaeon 2268197 Archaea Archaea 66.6 3.37e-11   NR MDP7658232.1 2268197 g53552 i0 41.2 0.985507246376812 68 40 98.6 0 205 2 139 206 MDP7658232.1 molecular chaperone TorD family protein [Nitrososphaerales archaeon] diamond 204 66.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;