contig_metadata
5 rows where bioproject = "PRJNA546018" and tax_phylum = "Kitrinoviricota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1786852 | 1786852 | PRJNA546018_S_NODE_60062_length_191_cov_4.476923_g59737_i0 | PRJNA546018 | 60062 | 191 | 4.476923 | 8.55092293 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.005 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g59737 | i0 | 100 | 0.151832460732984 | 29 | 0 | 15 | 0 | 163 | 191 | 44 | 16 | Carnation latent virus isolate KL, complete genome | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 4338193 | 4338193 | PRJNA546018_S_NODE_47704_length_220_cov_2.018868_g47379_i0 | PRJNA546018 | 47704 | 220 | 2.018868 | 4.4415096 | Tobamovirus tabaci | 3432891 | Viruses | Viruses | 348 | 2.2200000000000005e-91 | NTclustered | gi|2647550519|gb|OR843964.1| | 12242 | g47379 | i0 | 98.485 | 89.4181818181818 | 198 | 2 | 90 | 1 | 1 | 197 | 742 | 545 | Tobacco mosaic virus strain MR644-18E/3430 nonstructural polyprotein p183, nonstructural polyprotein p126, and movement protein genes, partial cds | blastn | 19672 | 348 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Virgaviridae | Tobamovirus | Tobamovirus tabaci | ||
| 5614606 | 5614606 | PRJNA546018_S_NODE_22505_length_338_cov_6.541516_g22180_i0 | PRJNA546018 | 22505 | 338 | 6.541516 | 22.11032408 | Wuhan aphid virus 1 | 1746067 | Viruses | Viruses | 313 | 1.33e-80 | NTclustered | gi|943496544|gb|KR902723.1| | 1746067 | g22180 | i0 | 84.543 | 1.87573964497041 | 317 | 47 | 93 | 2 | 1 | 316 | 1507 | 1192 | Wuhan aphid virus 1 strain WHYC-1 segment 3, complete sequence | blastn | 634 | 313 | 1 | Viruses | Jingmenvirus group | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Wuhan aphid virus 1 | ||
| 11322320 | 11322320 | PRJNA546018_S_NODE_38009_length_250_cov_6.211640_g37684_i0 | PRJNA546018 | 38009 | 250 | 6.21164 | 15.5291 | Tobamovirus | 12234 | Viruses | Viruses | 425 | 1.16e-114 | NTclustered | gi|1821461776|gb|MN267897.1| | 12239 | g37684 | i0 | 99.571 | 86.024 | 233 | 1 | 93 | 0 | 1 | 233 | 3830 | 3598 | Pepper mild mottle virus isolate PMMoV_WW17-E1-Nben-pos, complete genome | blastn | 21506 | 425 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Virgaviridae | Tobamovirus | Tobamovirus capsici | ||
| 24736975 | 24736975 | PRJNA546018_S_NODE_35060_length_262_cov_2.099502_g34735_i0 | PRJNA546018 | 35060 | 262 | 2.099502 | 5.50069524 | Wuhan aphid virus 1 | 1746067 | Viruses | Viruses | 272 | 1.69e-68 | NTclustered | gi|1817956135|dbj|LC516841.1| | 1746067 | g34735 | i0 | 87.654 | 2.75954198473282 | 243 | 19 | 90 | 8 | 24 | 258 | 2314 | 2553 | Wuhan aphid virus 1 06BaA3 gene for non-structural protein 2, complete cds | blastn | 723 | 272 | 1 | Viruses | Jingmenvirus group | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Wuhan aphid virus 1 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;