contig_metadata
11 rows where bioproject = "PRJNA546018" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8164167 | 8164167 | PRJNA546018_S_NODE_54907_length_206_cov_0.896552_g54582_i0 | PRJNA546018 | 54907 | 206 | 0.896552 | 1.84689712 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 120 | 7.22e-30 | NR | MES2856630.1 | 3034175 | g54582 | i0 | 80.9 | 0.990291262135922 | 68 | 13 | 99 | 0 | 3 | 206 | 194 | 261 | MES2856630.1 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase [Bdellovibrionota bacterium] | diamond | 204 | 120 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 8164298 | 8164298 | PRJNA546018_S_NODE_9007_length_582_cov_7.760077_g8691_i0 | PRJNA546018 | 9007 | 582 | 7.760077 | 45.16364814 | Bdellovibrionota | 3018035 | Bacteria | Bacteria | 318 | 2.27e-103 | NR | MBI2711298.1 | 28201 | g8691 | i0 | 77.6 | 5.65979381443299 | 183 | 41 | 94.3 | 0 | 22 | 570 | 29 | 211 | MBI2711298.1 glutamine--tRNA ligase/YqeY domain fusion protein [Bdellovibrio sp.] | diamond | 3294 | 320 | 0.99375 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 10715061 | 10715061 | PRJNA546018_S_NODE_31069_length_281_cov_2.145455_g30744_i0 | PRJNA546018 | 31069 | 281 | 2.145455 | 6.02872855 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 107 | 1.03e-24 | NR | MBA2404122.1 | 2053517 | g30744 | i0 | 84.3 | 0.747330960854093 | 70 | 11 | 74.7 | 0 | 260 | 51 | 113 | 182 | MBA2404122.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 210 | 107 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 23463063 | 23463063 | PRJNA546018_S_NODE_23559_length_329_cov_6.611940_g23234_i0 | PRJNA546018 | 23559 | 329 | 6.61194 | 21.7532826 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 429 | 1.2199999999999999e-115 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g23234 | i0 | 92.905 | 5.45896656534954 | 296 | 20 | 90 | 1 | 25 | 320 | 512095 | 512389 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 1796 | 429 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 27551639 | 27551639 | PRJNA546018_S_NODE_7424_length_652_cov_4.345178_g7126_i0 | PRJNA546018 | 7424 | 652 | 4.345178 | 28.33056056 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 215 | 1.3699999999999999e-62 | NR | HEY8278402.1 | 3034175 | g7126 | i0 | 62.9 | 0.80521472392638 | 175 | 62 | 80.1 | 3 | 536 | 15 | 183 | 355 | HEY8278402.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase [Bdellovibrionota bacterium] | diamond | 525 | 215 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 28657101 | 28657101 | PRJNA546018_S_NODE_56647_length_203_cov_1.394366_g56322_i0 | PRJNA546018 | 56647 | 203 | 1.394366 | 2.83056298 | Bacteriovoracales bacterium | 2497611 | Bacteria | Bacteria | 65.9 | 1.3099999999999999e-10 | NR | MFI5389776.1 | 2497611 | g56322 | i0 | 58.5 | 3.93103448275862 | 53 | 22 | 78.3 | 0 | 22 | 180 | 127 | 179 | MFI5389776.1 hypothetical protein [Bacteriovoracales bacterium] | diamond | 798 | 65.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracales bacterium | ||||
| 29477571 | 29477571 | PRJNA546018_S_NODE_47770_length_220_cov_1.628931_g47445_i0 | PRJNA546018 | 47770 | 220 | 1.628931 | 3.5836482 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 68.2 | 2.41e-11 | NR | MEK6704275.1 | 3034175 | g47445 | i0 | 55.4 | 0.763636363636364 | 56 | 25 | 76.4 | 0 | 169 | 2 | 40 | 95 | MEK6704275.1 hypothetical protein [Bdellovibrionota bacterium] | diamond | 168 | 68.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 29540907 | 29540907 | PRJNA546018_S_NODE_8750_length_593_cov_2.422932_g8436_i0 | PRJNA546018 | 8750 | 593 | 2.422932 | 14.36798676 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 92.4 | 1.08e-20 | NR | MDZ4084007.1 | 2053517 | g8436 | i0 | 53.8 | 0.39460370994941 | 78 | 36 | 39.5 | 0 | 235 | 2 | 11 | 88 | MDZ4084007.1 acyl carrier protein [Bdellovibrionales bacterium] | diamond | 234 | 92.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30488673 | 30488673 | PRJNA546018_S_NODE_25933_length_312_cov_2.549801_g25608_i0 | PRJNA546018 | 25933 | 312 | 2.549801 | 7.95537912 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 77.8 | 4.03e-14 | NR | MDX9730510.1 | 2053517 | g25608 | i0 | 81.8 | 0.423076923076923 | 44 | 8 | 42.3 | 0 | 296 | 165 | 615 | 658 | MDX9730510.1 ABC transporter permease [Bdellovibrionales bacterium] | diamond | 132 | 77.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30566376 | 30566376 | PRJNA546018_S_NODE_34153_length_266_cov_1.629268_g33828_i0 | PRJNA546018 | 34153 | 266 | 1.629268 | 4.33385288 | Bacteria | 2 | Bacteria | Bacteria | 167 | 3.3200000000000002e-49 | NR | MBX3032880.1 | 2026715 | g33828 | i0 | 85 | 7.25187969924812 | 80 | 12 | 90.2 | 0 | 266 | 27 | 23 | 102 | MBX3032880.1 SRPBCC domain-containing protein [Pseudobdellovibrionaceae bacterium] | diamond | 1929 | 167 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 32890350 | 32890350 | PRJNA546018_S_NODE_8140_length_617_cov_7.221223_g7830_i0 | PRJNA546018 | 8140 | 617 | 7.221223 | 44.55494591 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 280 | 4.32e-88 | NR | HEY8279176.1 | 3034175 | g7830 | i0 | 75.7 | 0.918962722852512 | 189 | 46 | 91.9 | 0 | 588 | 22 | 1 | 189 | HEY8279176.1 type IV-A pilus assembly ATPase PilB [Bdellovibrionota bacterium] | diamond | 567 | 280 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;