contig_metadata
18 rows where bioproject = "PRJNA546018" and tax_phylum = "Acidobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3062240 | 3062240 | PRJNA546018_S_NODE_56503_length_203_cov_2.281690_g56178_i0 | PRJNA546018 | 56503 | 203 | 2.28169 | 4.6318307 | Bryobacterales bacterium F-183 | 2802972 | Bacteria | Bacteria | 167 | 6.0599999999999995e-37 | NTclustered | gi|2131941663|dbj|AP025252.1| | 2802972 | g56178 | i0 | 83.511 | 359.20197044335 | 188 | 21 | 88 | 5 | 25 | 203 | 634600 | 634414 | Bryobacterales bacterium F-183 DNA, nearly complete genome | blastn | 72918 | 167 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium F-183 | ||||
| 10714975 | 10714975 | PRJNA546018_S_NODE_25509_length_315_cov_2.086614_g25184_i0 | PRJNA546018 | 25509 | 315 | 2.086614 | 6.5728341 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 505 | 1.8799999999999995e-138 | NTclustered | gi|2874254027|emb|OY970352.1| | 171953 | g25184 | i0 | 95.556 | 144.653968253968 | 315 | 14 | 100 | 0 | 1 | 315 | 2365681 | 2365995 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 | blastn | 45566 | 505 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 13264639 | 13264639 | PRJNA546018_S_NODE_24691_length_321_cov_2.134615_g24366_i0 | PRJNA546018 | 24691 | 321 | 2.134615 | 6.85211415 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 470 | 7.02e-128 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g24366 | i0 | 95.033 | 135.034267912773 | 302 | 10 | 93 | 5 | 2 | 299 | 3299477 | 3299177 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 43346 | 470 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 13265007 | 13265007 | PRJNA546018_S_NODE_44151_length_230_cov_4.917160_g43826_i0 | PRJNA546018 | 44151 | 230 | 4.91716 | 11.309468 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 239 | 1.47e-58 | NTclustered | gi|217038907|gb|EU810998.1| | 171953 | g43826 | i0 | 100 | 102.504347826087 | 129 | 0 | 56 | 0 | 1 | 129 | 129 | 1 | Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence | blastn | 23576 | 239 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 14539404 | 14539404 | PRJNA546018_S_NODE_10972_length_518_cov_14.645514_g10649_i0 | PRJNA546018 | 10972 | 518 | 14.645514 | 75.86376252 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 597 | 5.1999999999999986e-166 | NTclustered | gi|76574288|gb|DQ139436.1| | 171953 | g10649 | i0 | 88.462 | 252.552123552124 | 494 | 57 | 95 | 0 | 1 | 494 | 494 | 1 | Uncultured Acidobacteria bacterium clone CAL6 23S ribosomal RNA gene, partial sequence | blastn | 130822 | 597 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 15813436 | 15813436 | PRJNA546018_S_NODE_14973_length_429_cov_6.244565_g14648_i0 | PRJNA546018 | 14973 | 429 | 6.244565 | 26.78918385 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 79.7 | 3.7e-15 | NR | HJU55860.1 | 2283092 | g14648 | i0 | 37.6 | 0.818181818181818 | 117 | 67 | 77.6 | 1 | 405 | 73 | 77 | 193 | HJU55860.1 hypothetical protein [Pyrinomonadaceae bacterium] | diamond | 351 | 79.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 18362392 | 18362392 | PRJNA546018_S_NODE_24735_length_321_cov_1.261538_g24410_i0 | PRJNA546018 | 24735 | 321 | 1.261538 | 4.04953698 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 150 | 1.33e-40 | NR | HXT72181.1 | 2910147 | g24410 | i0 | 78.2 | 0.94392523364486 | 101 | 22 | 94.4 | 0 | 12 | 314 | 55 | 155 | HXT72181.1 ATP-binding protein [Vicinamibacterales bacterium] | diamond | 303 | 150 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 20913116 | 20913116 | PRJNA546018_S_NODE_4017_length_922_cov_8.210221_g3803_i0 | PRJNA546018 | 4017 | 922 | 8.210221 | 75.69823762 | Terriglobus roseus | 392734 | Bacteria | Bacteria | 1531 | 0 | NTclustered | gi|390410848|gb|CP003379.1| | 926566 | g3803 | i0 | 97.961 | 99.3937093275488 | 883 | 18 | 96 | 0 | 17 | 899 | 2078313 | 2077431 | Terriglobus roseus DSM 18391, complete genome | blastn | 91641 | 1531 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terriglobus | Terriglobus roseus | ||
| 22187511 | 22187511 | PRJNA546018_S_NODE_1698_length_1420_cov_2.263429_g1559_i0 | PRJNA546018 | 1698 | 1420 | 2.263429 | 32.1406918 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 471 | 1.6099999999999996e-153 | NR | HEX2460229.1 | 2910147 | g1559 | i0 | 80.3 | 0.665492957746479 | 315 | 61 | 66.3 | 1 | 1195 | 254 | 1 | 315 | HEX2460229.1 protein kinase [Vicinamibacterales bacterium] | diamond | 945 | 471 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 27140764 | 27140764 | PRJNA546018_S_NODE_40522_length_242_cov_2.480663_g40197_i0 | PRJNA546018 | 40522 | 242 | 2.480663 | 6.00320446 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 73.2 | 1.62e-13 | NR | HVH29626.1 | 2910147 | g40197 | i0 | 51.4 | 7.22727272727273 | 70 | 34 | 86.8 | 0 | 213 | 4 | 31 | 100 | HVH29626.1 response regulator [Vicinamibacterales bacterium] | diamond | 1749 | 73.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 27520266 | 27520266 | PRJNA546018_S_NODE_55223_length_205_cov_1.805556_g54898_i0 | PRJNA546018 | 55223 | 205 | 1.805556 | 3.7013898 | Terriglobales bacterium | 2282142 | Bacteria | Bacteria | 120 | 2.24e-30 | NR | HZS98367.1 | 2282142 | g54898 | i0 | 87.9 | 1.93170731707317 | 66 | 8 | 96.6 | 0 | 8 | 205 | 217 | 282 | HZS98367.1 metallophosphoesterase [Terriglobales bacterium] | diamond | 396 | 120 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Terriglobales bacterium | ||||
| 27551630 | 27551630 | PRJNA546018_S_NODE_19364_length_369_cov_2.081169_g19039_i0 | PRJNA546018 | 19364 | 369 | 2.081169 | 7.67951361 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 81.3 | 4.19e-15 | NR | MBS1877142.1 | 1978231 | g19039 | i0 | 78.7 | 1.91056910569106 | 47 | 10 | 38.2 | 0 | 357 | 217 | 383 | 429 | MBS1877142.1 ribosome biogenesis GTPase Der [Acidobacteriota bacterium] | diamond | 705 | 81.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27835892 | 27835892 | PRJNA546018_S_NODE_36824_length_255_cov_2.293814_g36499_i0 | PRJNA546018 | 36824 | 255 | 2.293814 | 5.8492257 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 103 | 1.6099999999999997e-24 | NR | MCD9185946.1 | 2283092 | g36499 | i0 | 79.1 | 0.788235294117647 | 67 | 14 | 78.8 | 0 | 246 | 46 | 236 | 302 | MCD9185946.1 hypothetical protein [Pyrinomonadaceae bacterium] | diamond | 201 | 103 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 29540903 | 29540903 | PRJNA546018_S_NODE_47430_length_221_cov_1.525000_g47105_i0 | PRJNA546018 | 47430 | 221 | 1.525 | 3.37025 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 129 | 1.3199999999999998e-32 | NR | MCD9185977.1 | 2283092 | g47105 | i0 | 98.4 | 0.828054298642534 | 61 | 1 | 82.8 | 0 | 11 | 193 | 708 | 768 | MCD9185977.1 BamA/TamA family outer membrane protein [Pyrinomonadaceae bacterium] | diamond | 183 | 129 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 29776753 | 29776753 | PRJNA546018_S_NODE_21271_length_349_cov_9.270833_g20946_i0 | PRJNA546018 | 21271 | 349 | 9.270833 | 32.35520717 | Bacteria | 2 | Bacteria | Bacteria | 108 | 4.03e-27 | NR | MCU1288629.1 | 1978231 | g20946 | i0 | 71 | 2.69054441260745 | 62 | 18 | 53.3 | 0 | 327 | 142 | 115 | 176 | MCU1288629.1 spermine/spermidine N-acetyltransferase [Acidobacteriota bacterium] | diamond | 939 | 109 | 0.990825688073395 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 31388503 | 31388503 | PRJNA546018_S_NODE_52636_length_209_cov_1.506757_g52311_i0 | PRJNA546018 | 52636 | 209 | 1.506757 | 3.14912213 | Bacteria | 2 | Bacteria | Bacteria | 81.3 | 2.58e-18 | NR | MBZ5678364.1 | 2081523 | g52311 | i0 | 86.7 | 3.22966507177033 | 45 | 6 | 64.6 | 0 | 73 | 207 | 1 | 45 | MBZ5678364.1 DUF378 domain-containing protein [Terriglobia bacterium] | diamond | 675 | 81.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobia bacterium | |||||
| 32480934 | 32480934 | PRJNA546018_S_NODE_29179_length_291_cov_3.886957_g28854_i0 | PRJNA546018 | 29179 | 291 | 3.886957 | 11.31104487 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 83.2 | 7.47e-18 | NR | HEY3738940.1 | 2212468 | g28854 | i0 | 73.5 | 0.505154639175258 | 49 | 13 | 50.5 | 0 | 128 | 274 | 1 | 49 | HEY3738940.1 NUDIX hydrolase [Bryobacteraceae bacterium] | diamond | 147 | 83.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 32701463 | 32701463 | PRJNA546018_S_NODE_29360_length_290_cov_3.886463_g29035_i0 | PRJNA546018 | 29360 | 290 | 3.886463 | 11.2707427 | Thermoanaerobaculia bacterium | 2651171 | Bacteria | Bacteria | 42.7 | 0.0449 | NR | MFL6197426.1 | 2651171 | g29035 | i0 | 32.8 | 0.693103448275862 | 67 | 43 | 67.2 | 1 | 257 | 63 | 52 | 118 | MFL6197426.1 hypothetical protein [Thermoanaerobaculia bacterium] | diamond | 201 | 42.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;