RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA546018" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA546018 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13264873 13264873 PRJNA546018_S_NODE_36831_length_255_cov_2.216495_g36506_i0 PRJNA546018 36831 255 2.216495 5.65206225 Moloney murine leukemia virus 11801 Viruses Viruses 125 4.95e-31   NR NP_057933.2 11801 g36506 i0 96.7 2.14117647058824 61 2 71.8 0 64 246 658 718 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 546 125 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31500183 31500183 PRJNA546018_S_NODE_34176_length_266_cov_1.448780_g33851_i0 PRJNA546018 34176 266 1.44878 3.8537548 Moloney murine leukemia virus 11801 Viruses Viruses 167 8.12e-46   NR NP_057933.2 11801 g33851 i0 100 6.39473684210526 81 0 91.4 0 266 24 1083 1163 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 1701 167 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;