RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA546018", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA546018 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18362307 18362307 PRJNA546018_S_NODE_18875_length_374_cov_6.821086_g18550_i0 PRJNA546018 18875 374 6.821086 25.51086164 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 94 1.26e-22   NR PAA46805.1 282301 g18550 i0 74.6 1.3475935828877 59 15 47.3 0 303 127 1 59 PAA46805.1 hypothetical protein BOX15_Mlig026560g3 [Macrostomum lignano] diamond 504 94 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
26793138 26793138 PRJNA546018_S_NODE_44561_length_229_cov_1.988095_g44236_i0 PRJNA546018 44561 229 1.988095 4.55273755 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 43.5 0.0169   NR PAA83005.1 282301 g44236 i0 33.9 0.733624454148472 56 36 72.1 1 18 182 4554 4609 PAA83005.1 hypothetical protein BOX15_Mlig017817g1 [Macrostomum lignano] diamond 168 43.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28577021 28577021 PRJNA546018_S_NODE_9087_length_578_cov_15.106383_g8771_i0 PRJNA546018 9087 578 15.106383 87.31489374 Opisthokonta 33154 Platyhelminthes Platyhelminthes 47 0.0184   NR CAH8863868.1 157069 g8771 i0 50 0.524221453287197 34 17 17.6 0 23 124 255 288 CAH8863868.1 unnamed protein product [Trichobilharzia regenti] diamond 303 47 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia regenti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;