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contig_metadata

15 rows where bioproject = "PRJNA546018", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 15 ✖

tax_kingdom 1

  • Metazoa · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA546018 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
511167 511167 PRJNA546018_S_NODE_47101_length_222_cov_1.304348_g46776_i0 PRJNA546018 47101 222 1.304348 2.89565256 Mytilus trossulus 6551 Mollusca Mollusca 52.8 0.02   NTclustered gi|2693867728|ref|XM_063562824.1| 6551 g46776 i0 100 0.252252252252252 28 0 13 0 184 211 5820 5847 PREDICTED: Mytilus trossulus zinc finger protein 407-like (LOC134701690), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
1786856 1786856 PRJNA546018_S_NODE_60562_length_187_cov_6.857143_g60237_i0 PRJNA546018 60562 187 6.857143 12.82285741 Anadara broughtonii 148819 Mollusca Mollusca 52.8 0.016   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g60237 i0 100 0.149732620320856 28 0 15 0 160 187 59 32 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
2394569 2394569 PRJNA546018_S_NODE_18642_length_377_cov_4.386076_g18317_i0 PRJNA546018 18642 377 4.386076 16.53550652 Haliotis 6452 Mollusca Mollusca 67.6 1.28e-6   NTclustered gi|2245691845|ref|XM_046521204.2| 6454 g18317 i0 91.667 0.763925729442971 48 4 13 0 321 368 3172 3125 PREDICTED: Haliotis rufescens epidermal growth factor receptor-like (LOC124149536), transcript variant X2, mRNA blastn 288 67.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
3061602 3061602 PRJNA546018_S_NODE_17003_length_399_cov_1.730769_g16678_i0 PRJNA546018 17003 399 1.730769 6.90576831 Anadara broughtonii 148819 Mollusca Mollusca 54.7 0.011   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g16678 i0 100 0.0726817042606516 29 0 7 0 1 29 31 59 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
4947322 4947322 PRJNA546018_S_NODE_24704_length_321_cov_1.853846_g24379_i0 PRJNA546018 24704 321 1.853846 5.95084566 Metazoa 33208 Mollusca Mollusca 52.8 0.03   NTclustered gi|2427390617|ref|XM_052917999.1| 6604 g24379 i0 100 1.37071651090343 28 0 9 0 220 247 5153 5126 PREDICTED: Mya arenaria protein mono-ADP-ribosyltransferase PARP14-like (LOC128212513), mRNA blastn 440 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
5614670 5614670 PRJNA546018_S_NODE_26545_length_308_cov_2.809717_g26220_i0 PRJNA546018 26545 308 2.809717 8.65392836 Anadara broughtonii 148819 Mollusca Mollusca 52.8 0.029   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g26220 i0 100 0.0909090909090909 28 0 9 0 31 58 31 58 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
5614696 5614696 PRJNA546018_S_NODE_28325_length_296_cov_7.514894_g28000_i0 PRJNA546018 28325 296 7.514894 22.24408624 Sinonovacula constricta 98310 Mollusca Mollusca 56.5 0.002   NTclustered gi|937961735|gb|KR534869.1| 98310 g28000 i0 100 0.101351351351351 30 0 10 0 19 48 1 30 Sinonovacula constricta insulin-like peptide 1 mRNA, complete cds blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Solecurtidae Sinonovacula Sinonovacula constricta
9439010 9439010 PRJNA546018_S_NODE_16608_length_404_cov_3.288630_g16283_i0 PRJNA546018 16608 404 3.28863 13.2860652 Sinonovacula constricta 98310 Mollusca Mollusca 52.8 0.039   NTclustered gi|937961735|gb|KR534869.1| 98310 g16283 i0 100 0.0693069306930693 28 0 7 0 373 400 28 1 Sinonovacula constricta insulin-like peptide 1 mRNA, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Solecurtidae Sinonovacula Sinonovacula constricta
18362384 18362384 PRJNA546018_S_NODE_24335_length_324_cov_1.425856_g24010_i0 PRJNA546018 24335 324 1.425856 4.61977344 Sinonovacula constricta 98310 Mollusca Mollusca 52.8 0.03   NTclustered gi|937961735|gb|KR534869.1| 98310 g24010 i0 100 0.0864197530864197 28 0 9 0 297 324 32 5 Sinonovacula constricta insulin-like peptide 1 mRNA, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Solecurtidae Sinonovacula Sinonovacula constricta
20245813 20245813 PRJNA546018_S_NODE_56596_length_203_cov_1.669014_g56271_i0 PRJNA546018 56596 203 1.669014 3.38809842 Metazoa 33208 Mollusca Mollusca 375 9.24e-100   NTclustered gi|1928112764|gb|MT947788.1| 6523 g56271 i0 100 99.9605911330049 203 0 100 0 1 203 1410 1612 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 20292 375 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
24071226 24071226 PRJNA546018_S_NODE_45539_length_226_cov_2.757576_g45214_i0 PRJNA546018 45539 226 2.757576 6.23212176 Cyclophorus 75122 Mollusca Mollusca 71.3 5.55e-8   NTclustered gi|2251842947|dbj|LC658828.1| 494922 g45214 i0 85.333 32.9690265486726 75 4 31 7 92 162 506 435 Cyclophorus formosaensis KC8691 mitochondrial gene for 16S rRNA, partial sequence blastn 7451 71.3 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Cyclophoridae Cyclophorus Cyclophorus formosaensis
24736633 24736633 PRJNA546018_S_NODE_13960_length_447_cov_9.051813_g13635_i0 PRJNA546018 13960 447 9.051813 40.46160411 Sinonovacula constricta 98310 Mollusca Mollusca 52.8 0.043   NTclustered gi|937961735|gb|KR534869.1| 98310 g13635 i0 100 0.0626398210290828 28 0 6 0 1 28 5 32 Sinonovacula constricta insulin-like peptide 1 mRNA, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Solecurtidae Sinonovacula Sinonovacula constricta
27299233 27299233 PRJNA546018_S_NODE_24803_length_320_cov_3.054054_g24478_i0 PRJNA546018 24803 320 3.054054 9.7729728 Mytilus edulis 6550 Mollusca Mollusca 48.1 0.00109   NR CAG2204155.1 6550 g24478 i0 27 1.040625 111 71 94.7 2 320 18 121 231 CAG2204155.1 unnamed protein product [Mytilus edulis] diamond 333 48.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
27661565 27661565 PRJNA546018_S_NODE_39704_length_244_cov_2.420765_g39379_i0 PRJNA546018 39704 244 2.420765 5.9066666 Mytilus 6548 Mollusca Mollusca 44.3 0.0104   NR CAG2218763.1 6550 g39379 i0 35.5 3.73770491803279 76 37 88.5 3 16 231 206 273 CAG2218763.1 Tenascin-R,Angiopoietin-related protein 1,Ryncolin-1,Fibrinogen C domain-containing protein 1-A,Fibrinogen C domain-containing protein 1,Fibrinogen C domain-containing protein 1-B,Angiopoietin-2,Fibroleukin,Fibrinogen-like protein 1,Ficolin-2,Tenascin,Ficolin-1,Fibrinogen-like protein A,Microfibril-associated glycoprotein 4,Angiopoietin-related protein 7,Ryncolin-4 [Mytilus edulis] diamond 912 44.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
30472022 30472022 PRJNA546018_S_NODE_1853_length_1361_cov_9.640000_g1707_i0 PRJNA546018 1853 1361 9.64 131.2004 Opisthokonta 33154 Mollusca Mollusca 118 3.2200000000000004e-27   NR XP_053393133.1 6596 g1707 i0 37 5.76193975018369 184 82 38.8 4 629 1156 1 158 XP_053393133.1 ras-related protein Rac1-like isoform X2 [Mercenaria mercenaria] diamond 7842 119 0.991596638655462 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;