RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA546018", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA546018 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27330903 27330903 PRJNA546018_S_NODE_4683_length_848_cov_15.179161_g4446_i0 PRJNA546018 4683 848 15.179161 128.71928528 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 253 7.479999999999998e-81   NR XP_028413040.1 151771 g4446 i0 63.5 5.0377358490566 203 70 70.8 2 767 168 9 210 XP_028413040.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Dendronephthya gigantea] diamond 4272 253 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
28419348 28419348 PRJNA546018_S_NODE_29666_length_289_cov_1.236842_g29341_i0 PRJNA546018 29666 289 1.236842 3.57447338 Metazoa 33208 Cnidaria other_Eukaryota 47.4 0.00153   NR CAH3119332.1 104759 g29341 i0 50 2.04498269896194 30 14 31.1 1 90 179 1142 1170 CAH3119332.1 unnamed protein product [Porites lobata] diamond 591 47.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites lobata
30614933 30614933 PRJNA546018_S_NODE_15013_length_428_cov_9.220708_g14688_i0 PRJNA546018 15013 428 9.220708 39.46463024 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 48.1 0.00296   NR XP_057301061.1 13093 g14688 i0 30.3 1.52102803738318 132 64 81.3 7 398 51 137 256 XP_057301061.1 glycogenin-1-like [Hydractinia symbiolongicarpus] diamond 651 48.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;