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contig_metadata

3 rows where bioproject = "PRJNA546018", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA546018 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9439310 9439310 PRJNA546018_S_NODE_32528_length_273_cov_10.971698_g32203_i0 PRJNA546018 32528 273 10.971698 29.95273554 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 464 2.72e-126   NTclustered gi|238617604|gb|FJ973379.1| 646463 g32203 i0 100 89.4945054945055 251 0 92 0 23 273 78 328 Gymnophrys sp. ATCC 50923 28S ribosomal RNA gene, partial sequence blastn 24432 464 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
10715290 10715290 PRJNA546018_S_NODE_45469_length_226_cov_5.545455_g45144_i0 PRJNA546018 45469 226 5.545455 12.5327283 Thaumatomonas seravini 188939 SAR_Eukaryotes SAR_Eukaryotes 329 8.3e-86   NTclustered gi|161015724|gb|EF681958.1| 188939 g45144 i0 96.939 49.5619469026549 196 6 87 0 11 206 444 249 Thaumatomonas seravini strain HFCC58 28S ribosomal RNA gene, partial sequence blastn 11201 329 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas seravini
28846219 28846219 PRJNA546018_S_NODE_49168_length_216_cov_2.935484_g48843_i0 PRJNA546018 49168 216 2.935484 6.34064544 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 60.8 1.09e-8   NR MES1912723.1 1215613 g48843 i0 52.9 0.944444444444444 68 32 94.4 0 205 2 3068 3135 MES1912723.1 hypothetical protein [Cercozoa sp. M6MM] diamond 204 60.8 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;