contig_metadata
5 rows where bioproject = "PRJNA546018", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14539787 | 14539787 | PRJNA546018_S_NODE_35192_length_261_cov_6.290000_g34867_i0 | PRJNA546018 | 35192 | 261 | 6.29 | 16.4169 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 52.8 | 0.024 | NTclustered | gi|687865350|emb|LK927747.1| | 6239 | g34867 | i0 | 100 | 0.21455938697318 | 28 | 0 | 11 | 0 | 86 | 113 | 86818 | 86791 | Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000191 | blastn | 56 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 17088876 | 17088876 | PRJNA546018_S_NODE_5974_length_741_cov_12.114706_g5706_i0 | PRJNA546018 | 5974 | 741 | 12.114706 | 89.76997146 | Pratylenchus vulnus | 45931 | Nematoda | Nematoda | 56.5 | 0.006 | NTclustered | gi|1557394408|emb|LR031564.1| | 45931 | g5706 | i0 | 94.595 | 0.0499325236167341 | 37 | 1 | 5 | 1 | 1 | 36 | 26 | 62 | Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 | blastn | 37 | 56.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Pratylenchidae | Pratylenchus | Pratylenchus vulnus | |
| 18362279 | 18362279 | PRJNA546018_S_NODE_17235_length_395_cov_8.242515_g16910_i0 | PRJNA546018 | 17235 | 395 | 8.242515 | 32.55793425 | Pratylenchus goodeyi | 344392 | Nematoda | Nematoda | 189 | 2.7599999999999998e-43 | NTclustered | gi|2437461978|gb|ON496985.1| | 344392 | g16910 | i0 | 90.845 | 31.8227848101266 | 142 | 11 | 36 | 2 | 164 | 304 | 5258 | 5118 | Pratylenchus goodeyi isolate F1380-1 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence | blastn | 12570 | 189 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Pratylenchidae | Pratylenchus | Pratylenchus goodeyi | |
| 25345727 | 25345727 | PRJNA546018_S_NODE_7620_length_642_cov_13.554217_g7317_i0 | PRJNA546018 | 7620 | 642 | 13.554217 | 87.01807314 | Metazoa | 33208 | Nematoda | Nematoda | 676 | 0 | NTclustered | gi|158821895|gb|EU195959.1| | 479134 | g7317 | i0 | 97.015 | 47.9299065420561 | 402 | 10 | 62 | 2 | 10 | 410 | 2295 | 1895 | Diploscapter sp. JU359 28S ribosomal RNA gene, partial sequence | blastn | 30771 | 676 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Diploscapter | Diploscapter sp. JU359 | |
| 29808357 | 29808357 | PRJNA546018_S_NODE_23291_length_332_cov_1.546125_g22966_i0 | PRJNA546018 | 23291 | 332 | 1.546125 | 5.133135 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 72.4 | 6.81e-13 | NR | EGT33567.1 | 135651 | g22966 | i0 | 46.9 | 2.07831325301205 | 81 | 39 | 73.2 | 1 | 246 | 4 | 82 | 158 | EGT33567.1 CBN-RHEB-1 protein [Caenorhabditis brenneri] | diamond | 690 | 72.8 | 0.994505494505495 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis brenneri |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;