RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA546018" and tax_clade = "Jingmenvirus group"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Jingmenvirus group · 2 ✖

bioproject 1

  • PRJNA546018 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5614606 5614606 PRJNA546018_S_NODE_22505_length_338_cov_6.541516_g22180_i0 PRJNA546018 22505 338 6.541516 22.11032408 Wuhan aphid virus 1 1746067 Viruses Viruses 313 1.33e-80   NTclustered gi|943496544|gb|KR902723.1| 1746067 g22180 i0 84.543 1.87573964497041 317 47 93 2 1 316 1507 1192 Wuhan aphid virus 1 strain WHYC-1 segment 3, complete sequence blastn 634 313 1 Viruses Jingmenvirus group Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae   Wuhan aphid virus 1
24736975 24736975 PRJNA546018_S_NODE_35060_length_262_cov_2.099502_g34735_i0 PRJNA546018 35060 262 2.099502 5.50069524 Wuhan aphid virus 1 1746067 Viruses Viruses 272 1.69e-68   NTclustered gi|1817956135|dbj|LC516841.1| 1746067 g34735 i0 87.654 2.75954198473282 243 19 90 8 24 258 2314 2553 Wuhan aphid virus 1 06BaA3 gene for non-structural protein 2, complete cds blastn 723 272 1 Viruses Jingmenvirus group Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae   Wuhan aphid virus 1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;