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contig_metadata

21 rows where bioproject = "PRJNA543299" and tax_phylum = "Arthropoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA543299 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1118534 1118534 PRJNA543299_P_NODE_18181_length_176_cov_1.976378_g18024_i0 PRJNA543299 18181 176 1.976378 3.47842528 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 326 7.92e-85   NTclustered gi|16751927|gb|AF169720.2| 77687 g18024 i0 100 96.0965909090909 176 0 100 0 1 176 344 519 Anaspides tasmaniae large subunit ribosomal RNA gene, partial sequence blastn 16913 326 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Anaspidacea Anaspididae Anaspides Anaspides tasmaniae
1785103 1785103 PRJNA543299_P_NODE_23862_length_163_cov_0.894737_g23705_i0 PRJNA543299 23862 163 0.894737 1.45842131 Procambarus clarkii 6728 Arthropoda Arthropoda 56.5 0.001   NTclustered gi|2837570114|ref|XM_069313848.1| 6728 g23705 i0 85.714 0.343558282208589 56 4 34 4 13 68 152 203 PREDICTED: Procambarus clarkii protein LIAT1-like (LOC138357197), mRNA blastn 56 56.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Cambaridae Procambarus Procambarus clarkii
1785225 1785225 PRJNA543299_P_NODE_7662_length_267_cov_3.238532_g7505_i0 PRJNA543299 7662 267 3.238532 8.64688044 Corynoneura carriana 1278985 Arthropoda Arthropoda 252 2.24e-62   NTclustered gi|2490581767|gb|OQ834389.1| 2575444 g7505 i0 84.47 0.98876404494382 264 32 97 5 1 259 3159 3418 Corynoneura carriana kadalinka isolate COR-GUS4E8-8 510 large subunit ribosomal RNA gene, partial sequence blastn 264 252 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Corynoneura Corynoneura carriana
3060590 3060590 PRJNA543299_P_NODE_24623_length_162_cov_1.805310_g24466_i0 PRJNA543299 24623 162 1.80531 2.9246022 Helicoverpa assulta 52344 Arthropoda Arthropoda 52.8 0.013   NTclustered gi|2636206763|emb|OY979789.1| 52344 g24466 i0 100 0.172839506172839 28 0 17 0 54 81 12978788 12978761 Helicoverpa assulta genome assembly, chromosome: 15 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Noctuidae Helicoverpa Helicoverpa assulta
3060668 3060668 PRJNA543299_P_NODE_6143_length_296_cov_2.048583_g5987_i0 PRJNA543299 6143 296 2.048583 6.06380568 Clunio marinus 568069 Arthropoda Arthropoda 435 2.34e-117   NTclustered gi|1105063683|emb|LN833602.1| 568069 g5987 i0 93.023 100.530405405405 301 16 100 3 1 296 146 446 Clunio marinus genomic DNA sequence contains 18S rRNA gene, ITSITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate Jean blastn 29757 435 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Clunio Clunio marinus
8771662 8771662 PRJNA543299_P_NODE_3367_length_393_cov_3.613372_g3215_i0 PRJNA543299 3367 393 3.613372 14.20055196 Chironomidae 7149 Arthropoda Arthropoda 424 6.91e-114   NTclustered gi|1105063683|emb|LN833602.1| 568069 g3215 i0 86.386 92.5419847328244 404 36 100 14 1 393 3249 2854 Clunio marinus genomic DNA sequence contains 18S rRNA gene, ITSITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate Jean blastn 36369 424 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Clunio Clunio marinus
9437716 9437716 PRJNA543299_P_NODE_11228_length_223_cov_1.126437_g11071_i0 PRJNA543299 11228 223 1.126437 2.51195451 Corynoneura carriana 1278985 Arthropoda Arthropoda 315 2.29e-81   NTclustered gi|2490581767|gb|OQ834389.1| 2575444 g11071 i0 92.07 101.37668161435 227 12 100 5 1 223 924 700 Corynoneura carriana kadalinka isolate COR-GUS4E8-8 510 large subunit ribosomal RNA gene, partial sequence blastn 22607 315 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Corynoneura Corynoneura carriana
10713882 10713882 PRJNA543299_P_NODE_8209_length_259_cov_1.771429_g8052_i0 PRJNA543299 8209 259 1.771429 4.58800111 Thienemanniella vittata 879780 Arthropoda Arthropoda 398 2.6299999999999997e-106   NTclustered gi|1043385720|dbj|LC164785.1| 879780 g8052 i0 94.253 101.953667953668 261 13 100 1 1 259 528 268 Thienemanniella vittata gene for 28S ribosomal RNA, partial sequence blastn 26406 398 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Thienemanniella Thienemanniella vittata
11988456 11988456 PRJNA543299_P_NODE_25570_length_161_cov_1.366071_g25413_i0 PRJNA543299 25570 161 1.366071 2.19937431 Medioppia subpectinata 1979941 Arthropoda Arthropoda 52.8 0.013   NTclustered gi|1964708817|emb|OC858617.1| 1979941 g25413 i0 100 0.173913043478261 28 0 17 0 102 129 5067 5040 Medioppia subpectinata blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Oppiidae Medioppia Medioppia subpectinata
12597658 12597658 PRJNA543299_P_NODE_9750_length_238_cov_2.772487_g9593_i0 PRJNA543299 9750 238 2.772487 6.59851906 root 1 Root_unresolved Root_unresolved 418 1.8299999999999998e-112   NTclustered gi|294661761|dbj|AB526262.1| 6669 g9593 i0 98.319 241.336134453782 238 4 100 0 1 238 440 203 Daphnia pulex ncRNA, kairomone-inducible transcript blastn 57438 418 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia pulex
15812549 15812549 PRJNA543299_P_NODE_7533_length_269_cov_3.877273_g7376_i0 PRJNA543299 7533 269 3.877273 10.42986437 Corynoneura carriana 1278985 Arthropoda Arthropoda 409 1.27e-109   NTclustered gi|2490581767|gb|OQ834389.1| 2575444 g7376 i0 94.074 83.6245353159851 270 15 100 1 1 269 1469 1738 Corynoneura carriana kadalinka isolate COR-GUS4E8-8 510 large subunit ribosomal RNA gene, partial sequence blastn 22495 409 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Corynoneura Corynoneura carriana
17087291 17087291 PRJNA543299_P_NODE_6934_length_280_cov_2.645022_g6777_i0 PRJNA543299 6934 280 2.645022 7.4060616 Notocladius sp. 2 SRM-2010 891917 Arthropoda Arthropoda 414 2.86e-111   NTclustered gi|346682069|gb|HQ440783.1| 891917 g6777 i0 93.525 14.8321428571429 278 18 99 0 3 280 298 21 Notocladius sp. 2 SRM-2010 voucher NOTO 28S large subunit ribosomal RNA gene, partial sequence blastn 4153 414 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Notocladius Notocladius sp. 2 SRM-2010
18361091 18361091 PRJNA543299_P_NODE_17175_length_181_cov_1.545455_g17018_i0 PRJNA543299 17175 181 1.545455 2.79727355 Stegobium paniceum 295656 Arthropoda Arthropoda 335 1.36e-87   NTclustered gi|54179529|gb|AY748103.1| 295656 g17018 i0 100 100.46408839779 181 0 100 0 1 181 636 816 Stegobium paniceum voucher BMNH:679315 18S ribosomal RNA gene, partial sequence blastn 18184 335 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Coleoptera Ptinidae Stegobium Stegobium paniceum
18970182 18970182 PRJNA543299_P_NODE_25995_length_161_cov_0.910714_g25838_i0 PRJNA543299 25995 161 0.910714 1.46624954 root 1 Root_unresolved Root_unresolved 287 3.37e-73   NTclustered gi|78097479|gb|AC160245.2| 7176 g25838 i0 98.758 46.9254658385093 161 2 100 0 1 161 30417 30577 Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940136D9, complete sequence blastn 7555 287 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Culicidae Culex Culex quinquefasciatus
18970183 18970183 PRJNA543299_P_NODE_26695_length_156_cov_3.785047_g26538_i0 PRJNA543299 26695 156 3.785047 5.90467332 Chironomidae 7149 Arthropoda Arthropoda 178 2.03e-40   NTclustered gi|2486656233|gb|OQ819021.1| 611500 g26538 i0 87.261 86.75 157 18 100 2 1 156 1564 1719 Hydrobaenus laticaudus isolate 617 HYD-BAS8G7-10 internal transcribed spacer 2 and large subunit ribosomal RNA gene, partial sequence blastn 13533 178 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Hydrobaenus Hydrobaenus laticaudus
19635768 19635768 PRJNA543299_P_NODE_2296_length_466_cov_3.541966_g2151_i0 PRJNA543299 2296 466 3.541966 16.50556156 Notocladius sp. 2 SRM-2010 891917 Arthropoda Arthropoda 747 0   NTclustered gi|346681916|gb|HQ440630.1| 891917 g2151 i0 95.69 100.429184549356 464 20 99 0 1 464 88 551 Notocladius sp. 2 SRM-2010 voucher NOTO 18S ribosomal RNA gene, partial sequence blastn 46800 747 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Notocladius Notocladius sp. 2 SRM-2010
20245099 20245099 PRJNA543299_P_NODE_20016_length_167_cov_12.161017_g19859_i0 PRJNA543299 20016 167 12.161017 20.30889839 root 1 Root_unresolved Root_unresolved 60.2 8.37e-5   NTclustered gi|2864127362|ref|XM_070117547.1| 6689 g19859 i0 100 1.90419161676647 32 0 19 0 28 59 42 11 PREDICTED: Penaeus vannamei HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 (HUWE1), transcript variant X6, mRNA blastn 318 60.2 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Penaeidae Penaeus Penaeus vannamei
27235910 27235910 PRJNA543299_P_NODE_27223_length_151_cov_2.500000_g27066_i0 PRJNA543299 27223 151 2.5 3.775 Anthophora plagiata 597819 Arthropoda Arthropoda 43.1 0.00784   NR CAK9813121.1 597819 g27066 i0 48.6 2.04635761589404 35 18 69.5 0 105 1 222 256 CAK9813121.1 Transposable element Tc1 transposase [Anthophora plagiata] diamond 309 43.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Apidae Anthophora Anthophora plagiata
27804609 27804609 PRJNA543299_P_NODE_20804_length_167_cov_0.864407_g20647_i0 PRJNA543299 20804 167 0.864407 1.44355969 Ixodes hexagonus 34612 Arthropoda Arthropoda 48.1 1.62e-4   NR CAL6198435.1 34612 g20647 i0 65.6 0.574850299401198 32 11 57.5 0 161 66 182 213 CAL6198435.1 unnamed protein product [Ixodes hexagonus] diamond 96 48.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Ixodida Ixodidae Ixodes Ixodes hexagonus
30914386 30914386 PRJNA543299_P_NODE_23954_length_163_cov_0.894737_g23797_i0 PRJNA543299 23954 163 0.894737 1.45842131 Insecta 50557 Arthropoda Arthropoda 47 3.92e-4   NR XP_062714690.1 7160 g23797 i0 100 8.04294478527607 23 0 42.3 0 71 3 735 757 XP_062714690.1 alpha-actinin, sarcomeric isoform X2 [Aedes albopictus] diamond 1311 47 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Culicidae Aedes Aedes albopictus
32779206 32779206 PRJNA543299_P_NODE_24340_length_163_cov_0.894737_g24183_i0 PRJNA543299 24340 163 0.894737 1.45842131 Daphnia 6668 Arthropoda Arthropoda 50.4 1.19e-5   NR KZS20822.1 35525 g24183 i0 76.7 1.65644171779141 30 7 55.2 0 163 74 143 172 KZS20822.1 Uncharacterized protein APZ42_012487 [Daphnia magna] diamond 270 50.4 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia magna

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;