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712 rows where bioproject = "PRJNA543299" and tax_kingdom = "Pseudomonadati"

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tax_superkingdom 1

tax_kingdom 1

  • Pseudomonadati · 712 ✖

bioproject 1

  • PRJNA543299 · 712 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
509463 509463 PRJNA543299_P_NODE_10021_length_235_cov_1.639785_g9864_i0 PRJNA543299 10021 235 1.639785 3.85349475 Candidatus Ichthyocystis hellenicum 1561003 Bacteria Bacteria 73.1 1.62e-8   NTclustered gi|959201724|emb|LN906597.1| 1561003 g9864 i0 97.619 1.46808510638298 42 1 18 0 194 235 817736 817777 bacterium 2013Arg42i genome assembly Ark11, chromosome : I blastn 345 73.1 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Candidatus Ichthyocystis Candidatus Ichthyocystis hellenicum
509634 509634 PRJNA543299_P_NODE_20461_length_167_cov_0.864407_g20304_i0 PRJNA543299 20461 167 0.864407 1.44355969 Planctomycetota bacterium 2026780 Bacteria Bacteria 99.4 1.7699999999999998e-23   NR MEQ1892031.1 2026780 g20304 i0 98.2 1.97604790419162 55 1 98.8 0 167 3 95 149 MEQ1892031.1 type II methionyl aminopeptidase [Planctomycetota bacterium] diamond 330 99.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
509661 509661 PRJNA543299_P_NODE_21721_length_166_cov_0.871795_g21564_i0 PRJNA543299 21721 166 0.871795 1.4471797 Bradyrhizobium genosp. L 83637 Bacteria Bacteria 106 5.65e-25   NR WP_195785960.1 83637 g21564 i0 90.9 3.9578313253012 55 5 99.4 0 1 165 651 705 WP_195785960.1 TonB-dependent siderophore receptor [Bradyrhizobium genosp. L] diamond 657 106 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium genosp. L
509675 509675 PRJNA543299_P_NODE_23021_length_164_cov_0.886957_g22864_i0 PRJNA543299 23021 164 0.886957 1.45460948 Candidatus Ichthyocystis 2929841 Bacteria Bacteria 104 2.2899999999999998e-24   NR WP_092343441.1 2929841 g22864 i0 94.4 1.97560975609756 54 3 98.8 0 163 2 294 347 WP_092343441.1 MULTISPECIES: 30S ribosomal protein S1 [Candidatus Ichthyocystis] diamond 324 104 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Candidatus Ichthyocystis  
509708 509708 PRJNA543299_P_NODE_24661_length_162_cov_1.353982_g24504_i0 PRJNA543299 24661 162 1.353982 2.19345084 Bradyrhizobium sp. PSBB068 2715960 Bacteria Bacteria 300 4.36e-77   NTclustered gi|1979381481|gb|CP069300.1| 2715960 g24504 i0 100 5.12345679012346 162 0 100 0 1 162 690389 690550 Bradyrhizobium sp. PSBB068 chromosome, complete genome blastn 830 300 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. PSBB068
509713 509713 PRJNA543299_P_NODE_24901_length_162_cov_0.902655_g24744_i0 PRJNA543299 24901 162 0.902655 1.4623011 Crocinitomicaceae bacterium 2026728 Bacteria Bacteria 110 2.22e-27   NR MBP5994557.1 2026728 g24744 i0 100 11.7777777777778 53 0 98.1 0 161 3 195 247 MBP5994557.1 3-deoxy-7-phosphoheptulonate synthase [Crocinitomicaceae bacterium] diamond 1908 110 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Crocinitomicaceae   Crocinitomicaceae bacterium
509716 509716 PRJNA543299_P_NODE_25101_length_162_cov_0.902655_g24944_i0 PRJNA543299 25101 162 0.902655 1.4623011 Flavobacterium ammoniigenes 1751095 Bacteria Bacteria 204 3.52e-48   NTclustered gi|2119750057|dbj|AP025184.1| 1751095 g24944 i0 89.506 22.5061728395062 162 15 100 2 1 162 646079 645920 Flavobacterium ammoniigenes GENT5 DNA, complete genome blastn 3646 204 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium ammoniigenes
509728 509728 PRJNA543299_P_NODE_25681_length_161_cov_0.910714_g25524_i0 PRJNA543299 25681 161 0.910714 1.46624954 Bradyrhizobium sp. SK17 2057741 Bacteria Bacteria 241 2.66e-59   NTclustered gi|1304130835|gb|CP025113.1| 2057741 g25524 i0 93.75 16.8944099378882 160 10 99 0 1 160 4106764 4106923 Bradyrhizobium sp. SK17 chromosome, complete genome blastn 2720 241 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. SK17
509824 509824 PRJNA543299_P_NODE_9141_length_246_cov_0.974619_g8984_i0 PRJNA543299 9141 246 0.974619 2.39756274 Flavobacterium ammonificans 1751056 Bacteria Bacteria 455 1.4500000000000002e-123   NTclustered gi|2119752067|dbj|AP025185.1| 1751056 g8984 i0 100 1 246 0 100 0 1 246 740293 740048 Flavobacterium ammonificans SHINM13 DNA, complete genome blastn 246 455 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium ammonificans
1118537 1118537 PRJNA543299_P_NODE_20421_length_167_cov_0.864407_g20264_i0 PRJNA543299 20421 167 0.864407 1.44355969 Enterobacteriaceae 543 Bacteria Bacteria 309 7.53e-80   NTclustered gi|2650988455|gb|CP142548.1| 562 g20264 i0 100 100 167 0 100 0 1 167 4117888 4118054 Escherichia coli strain ExPEC_A382 chromosome, complete genome blastn 16700 309 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
1118538 1118538 PRJNA543299_P_NODE_20901_length_166_cov_5.965812_g20744_i0 PRJNA543299 20901 166 5.965812 9.90324792 Enterobacteriaceae 543 Bacteria Bacteria 307 2.69e-79   NTclustered gi|2650988455|gb|CP142548.1| 562 g20744 i0 100 100 166 0 100 0 1 166 1209927 1210092 Escherichia coli strain ExPEC_A382 chromosome, complete genome blastn 16600 307 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
1118539 1118539 PRJNA543299_P_NODE_24461_length_163_cov_0.894737_g24304_i0 PRJNA543299 24461 163 0.894737 1.45842131 Escherichia 561 Bacteria Bacteria 302 1.22e-77   NTclustered gi|2653344983|gb|CP142438.1| 562 g24304 i0 100 100 163 0 100 0 1 163 4312424 4312586 Escherichia coli strain Case 2 chromosome, complete genome blastn 16300 302 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
1118541 1118541 PRJNA543299_P_NODE_25881_length_161_cov_0.910714_g25724_i0 PRJNA543299 25881 161 0.910714 1.46624954 Escherichia 561 Bacteria Bacteria 298 1.56e-76   NTclustered gi|2650988455|gb|CP142548.1| 562 g25724 i0 100 101 161 0 100 0 1 161 3467439 3467599 Escherichia coli strain ExPEC_A382 chromosome, complete genome blastn 16261 298 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
1785002 1785002 PRJNA543299_P_NODE_18562_length_174_cov_2.032000_g18405_i0 PRJNA543299 18562 174 2.032 3.53568 Comamonas odontotermitis 379895 Bacteria Bacteria 88.6 4.3e-19   NR WP_233464528.1 379895 g18405 i0 70.7 14.7068965517241 58 17 100 0 1 174 13 70 WP_233464528.1 A/G-specific adenine glycosylase [Comamonas odontotermitis] diamond 2559 88.6 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Comamonas Comamonas odontotermitis
1785045 1785045 PRJNA543299_P_NODE_20482_length_167_cov_0.864407_g20325_i0 PRJNA543299 20482 167 0.864407 1.44355969 Flavobacterium sp. ZE23DGlu08 3059026 Bacteria Bacteria 209 7.85e-50   NTclustered gi|2548163737|gb|CP130045.1| 3059026 g20325 i0 89.697 87.0059880239521 165 16 99 1 2 166 1934811 1934974 Flavobacterium sp. ZE23DGlu08 chromosome, complete genome blastn 14530 209 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. ZE23DGlu08
1785064 1785064 PRJNA543299_P_NODE_21682_length_166_cov_0.871795_g21525_i0 PRJNA543299 21682 166 0.871795 1.4471797 Bradyrhizobium sp. CCGE-LA001 1223566 Bacteria Bacteria 158 2.8599999999999993e-34   NTclustered gi|982209562|gb|CP013949.1| 1223566 g21525 i0 84.568 2.93373493975904 162 22 97 3 1 161 7703973 7703814 Bradyrhizobium sp. CCGE-LA001 chromosome, complete genome blastn 487 158 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. CCGE-LA001
1785070 1785070 PRJNA543299_P_NODE_22082_length_165_cov_0.879310_g21925_i0 PRJNA543299 22082 165 0.87931 1.4508615 Dyella telluris 2763498 Bacteria Bacteria 172 1.02e-38   NTclustered gi|1896494344|gb|CP060412.1| 2763498 g21925 i0 85.802 20.830303030303 162 23 98 0 1 162 4341165 4341004 Dyella telluris strain G9 chromosome, complete genome blastn 3437 172 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Rhodanobacteraceae Dyella Dyella telluris
1785118 1785118 PRJNA543299_P_NODE_24842_length_162_cov_0.902655_g24685_i0 PRJNA543299 24842 162 0.902655 1.4623011 Bradyrhizobium sp. B124 3140245 Bacteria Bacteria 261 2.06e-65   NTclustered gi|2724667523|gb|CP152413.1| 3140245 g24685 i0 95.679 99.9814814814815 162 7 100 0 1 162 8547323 8547162 Bradyrhizobium sp. B124 chromosome, complete genome blastn 16197 261 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. B124
1785199 1785199 PRJNA543299_P_NODE_5622_length_309_cov_1.176923_g5466_i0 PRJNA543299 5622 309 1.176923 3.63669207 Candidatus Ichthyocystis hellenicum 1561003 Bacteria Bacteria 192 7.1899999999999995e-56   NR WP_092484014.1 1561003 g5466 i0 94.1 2.97087378640777 102 6 99 0 3 308 18 119 WP_092484014.1 translational GTPase TypA [Candidatus Ichthyocystis hellenicum] diamond 918 192 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Candidatus Ichthyocystis Candidatus Ichthyocystis hellenicum
2394104 2394104 PRJNA543299_P_NODE_16342_length_186_cov_1.116788_g16185_i0 PRJNA543299 16342 186 1.116788 2.07722568 Enterobacteriaceae 543 Bacteria Bacteria 344 2.34e-90   NTclustered gi|2650988455|gb|CP142548.1| 562 g16185 i0 100 101 186 0 100 0 1 186 283038 282853 Escherichia coli strain ExPEC_A382 chromosome, complete genome blastn 18786 344 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
2394105 2394105 PRJNA543299_P_NODE_17802_length_178_cov_1.441860_g17645_i0 PRJNA543299 17802 178 1.44186 2.5665108 Fluviicola 332102 Bacteria Bacteria 207 3.04e-49   NTclustered gi|470488043|ref|NR_076848.1| 191579 g17645 i0 87.64 87.4719101123596 178 22 100 0 1 178 465 288 Fluviicola taffensis strain RW262 23S ribosomal RNA gene, complete sequence blastn 15570 207 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Crocinitomicaceae Fluviicola Fluviicola taffensis
2394108 2394108 PRJNA543299_P_NODE_21262_length_166_cov_0.871795_g21105_i0 PRJNA543299 21262 166 0.871795 1.4471797 Sphingomonadaceae 41297 Bacteria Bacteria 78.7 2.29e-10   NTclustered gi|1469269030|gb|CP028347.1| 1016987 g21105 i0 97.778 5.39759036144578 45 1 27 0 95 139 2199408 2199364 Novosphingobium sp. THN1 chromosome, complete genome blastn 896 78.7 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Novosphingobium Novosphingobium sp. THN1
2394109 2394109 PRJNA543299_P_NODE_22442_length_165_cov_0.879310_g22285_i0 PRJNA543299 22442 165 0.87931 1.4508615 Enterobacteriaceae 543 Bacteria Bacteria 305 9.59e-79   NTclustered gi|2653344983|gb|CP142438.1| 562 g22285 i0 100 100 165 0 100 0 1 165 3309863 3310027 Escherichia coli strain Case 2 chromosome, complete genome blastn 16500 305 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
2394110 2394110 PRJNA543299_P_NODE_22862_length_164_cov_1.226087_g22705_i0 PRJNA543299 22862 164 1.226087 2.01078268 Flavobacterium 237 Bacteria Bacteria 182 1.67e-41   NTclustered gi|2808367112|gb|PQ358699.1| 239 g22705 i0 99.01 265.756097560976 101 1 62 0 64 164 1505 1405 Flavobacterium sp. strain DSM 102425, strain Root901 16S ribosomal RNA gene, partial sequence blastn 43584 182 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
2394112 2394112 PRJNA543299_P_NODE_23322_length_164_cov_0.886957_g23165_i0 PRJNA543299 23322 164 0.886957 1.45460948 Enterobacteriaceae 543 Bacteria Bacteria 303 3.42e-78   NTclustered gi|2023981091|gb|CP072662.1| 562 g23165 i0 100 100 164 0 100 0 1 164 2031182 2031345 Escherichia coli strain BW25113 frmA KO chromosome blastn 16400 303 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
2394113 2394113 PRJNA543299_P_NODE_24662_length_162_cov_1.353982_g24505_i0 PRJNA543299 24662 162 1.353982 2.19345084 Enterobacteriaceae 543 Bacteria Bacteria 298 1.57e-76   NTclustered gi|2653344983|gb|CP142438.1| 562 g24505 i0 100 99.3827160493827 161 0 99 0 1 161 2426783 2426623 Escherichia coli strain Case 2 chromosome, complete genome blastn 16100 298 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
2394114 2394114 PRJNA543299_P_NODE_24782_length_162_cov_0.902655_g24625_i0 PRJNA543299 24782 162 0.902655 1.4623011 Stenotrophomonas 40323 Bacteria Bacteria 300 4.36e-77   NTclustered gi|1944406984|gb|CP056088.1| 40324 g24625 i0 100 100.981481481481 162 0 100 0 1 162 3477794 3477633 Stenotrophomonas maltophilia strain Oak Ridge strain 02 chromosome blastn 16359 300 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas Stenotrophomonas maltophilia
2394116 2394116 PRJNA543299_P_NODE_24982_length_162_cov_0.902655_g24825_i0 PRJNA543299 24982 162 0.902655 1.4623011 Escherichia 561 Bacteria Bacteria 300 4.36e-77   NTclustered gi|2841922414|gb|CP163901.1| 562 g24825 i0 100 100 162 0 100 0 1 162 393768 393929 Escherichia coli strain OXEC-129 chromosome, complete genome blastn 16200 300 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
3060327 3060327 PRJNA543299_P_NODE_10143_length_234_cov_0.945946_g9986_i0 PRJNA543299 10143 234 0.945946 2.21351364 Bradyrhizobium sp. SK17 2057741 Bacteria Bacteria 289 1.47e-73   NTclustered gi|1304130835|gb|CP025113.1| 2057741 g9986 i0 93.367 81.6239316239316 196 11 83 2 40 234 7954357 7954551 Bradyrhizobium sp. SK17 chromosome, complete genome blastn 19100 289 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. SK17
3060348 3060348 PRJNA543299_P_NODE_12003_length_216_cov_1.071856_g11846_i0 PRJNA543299 12003 216 1.071856 2.31520896 Rheinheimera sp. F8 1763998 Bacteria Bacteria 311 2.85e-80   NTclustered gi|975021511|gb|CP013656.1| 1763998 g11846 i0 92.627 890.657407407407 217 14 100 2 1 216 415902 416117 Rheinheimera sp. F8 genome blastn 192382 311 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. F8
3060416 3060416 PRJNA543299_P_NODE_15783_length_189_cov_1.092857_g15626_i0 PRJNA543299 15783 189 1.092857 2.06549973 Niabella ginsenosidivorans 1176587 Bacteria Bacteria 62.1 2.69e-5   NTclustered gi|1033838715|gb|CP015772.1| 1176587 g15626 i0 97.222 0.19047619047619 36 1 19 0 4 39 4649651 4649616 Niabella ginsenosidivorans strain BS26 chromosome, complete genome blastn 36 62.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Niabella Niabella ginsenosidivorans
3060511 3060511 PRJNA543299_P_NODE_20463_length_167_cov_0.864407_g20306_i0 PRJNA543299 20463 167 0.864407 1.44355969 Methylorubrum extorquens 408 Bacteria Bacteria 231 1.68e-56   NTclustered gi|2508467435|gb|CP073634.1| 408 g20306 i0 91.667 1.0059880239521 168 13 100 1 1 167 12877 12710 Methylorubrum extorquens strain ATCC 55366 plasmid pME152, complete sequence blastn 168 231 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum extorquens
3060549 3060549 PRJNA543299_P_NODE_22523_length_165_cov_0.879310_g22366_i0 PRJNA543299 22523 165 0.87931 1.4508615 Pelomonas aquatica 431058 Bacteria Bacteria 118 2.3099999999999997e-31   NR WP_268153911.1 431058 g22366 i0 100 0.981818181818182 54 0 98.2 0 3 164 188 241 WP_268153911.1 UDP-2,3-diacylglucosamine diphosphatase [Pelomonas aquatica] diamond 162 118 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Pelomonas aquatica
3060559 3060559 PRJNA543299_P_NODE_23143_length_164_cov_0.886957_g22986_i0 PRJNA543299 23143 164 0.886957 1.45460948 Acidobacteria bacterium SCN 69-37 1660160 Bacteria Bacteria 98.2 3.74e-22   NR ODS52425.1 1660160 g22986 i0 94.4 0.98780487804878 54 3 98.8 0 1 162 399 452 ODS52425.1 MAG: cation transporter [Acidobacteria bacterium SCN 69-37] diamond 162 98.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium SCN 69-37
3060561 3060561 PRJNA543299_P_NODE_23343_length_164_cov_0.886957_g23186_i0 PRJNA543299 23343 164 0.886957 1.45460948 Bradyrhizobium sp. SK17 2057741 Bacteria Bacteria 270 3.4699999999999992e-68   NTclustered gi|1304130835|gb|CP025113.1| 2057741 g23186 i0 96.341 25.9512195121951 164 6 100 0 1 164 3858869 3858706 Bradyrhizobium sp. SK17 chromosome, complete genome blastn 4256 270 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. SK17
3060564 3060564 PRJNA543299_P_NODE_23443_length_164_cov_0.886957_g23286_i0 PRJNA543299 23443 164 0.886957 1.45460948 Bradyrhizobium sp. PSBB068 2715960 Bacteria Bacteria 231 1.6399999999999998e-56   NTclustered gi|1979381481|gb|CP069300.1| 2715960 g23286 i0 92.073 93.2256097560976 164 13 100 0 1 164 4136616 4136453 Bradyrhizobium sp. PSBB068 chromosome, complete genome blastn 15289 231 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. PSBB068
3060645 3060645 PRJNA543299_P_NODE_3883_length_367_cov_2.342767_g3728_i0 PRJNA543299 3883 367 2.342767 8.59795489 Candidatus Gillettellia adelgis 1177218 Bacteria Bacteria 52.8 0.035   NTclustered gi|2119948350|gb|CP047043.1| 1177218 g3728 i0 100 0.0762942779291553 28 0 8 0 262 289 143894 143867 Candidatus Gillettellia cooleyia isolate 19-005 chromosome, complete genome blastn 28 52.8 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Gillettellia Candidatus Gillettellia adelgis
3669944 3669944 PRJNA543299_P_NODE_14723_length_195_cov_4.102740_g14566_i0 PRJNA543299 14723 195 4.10274 8.000343 Lysobacter 68 Bacteria Bacteria 350 5.34e-92   NTclustered gi|951704250|gb|CP011129.1| 84531 g14566 i0 98.974 196.994871794872 195 2 100 0 1 195 4801744 4801550 Lysobacter antibioticus strain 76, complete genome blastn 38414 350 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Lysobacter Lysobacter antibioticus
3669945 3669945 PRJNA543299_P_NODE_22483_length_165_cov_0.879310_g22326_i0 PRJNA543299 22483 165 0.87931 1.4508615 Enterobacteriaceae 543 Bacteria Bacteria 305 9.59e-79   NTclustered gi|2653344983|gb|CP142438.1| 562 g22326 i0 100 100 165 0 100 0 1 165 714603 714439 Escherichia coli strain Case 2 chromosome, complete genome blastn 16500 305 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
3669946 3669946 PRJNA543299_P_NODE_23763_length_163_cov_0.894737_g23606_i0 PRJNA543299 23763 163 0.894737 1.45842131 Enterobacteriaceae 543 Bacteria Bacteria 302 1.22e-77   NTclustered gi|2650988455|gb|CP142548.1| 562 g23606 i0 100 100 163 0 100 0 1 163 3590110 3590272 Escherichia coli strain ExPEC_A382 chromosome, complete genome blastn 16300 302 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
3669947 3669947 PRJNA543299_P_NODE_24303_length_163_cov_0.894737_g24146_i0 PRJNA543299 24303 163 0.894737 1.45842131 Variovorax 34072 Bacteria Bacteria 119 1.32e-22   NTclustered gi|1972895586|gb|CP063166.1| 34073 g24146 i0 81.081 5.30674846625767 148 28 91 0 3 150 2389955 2390102 Variovorax paradoxus strain VAI-C chromosome, complete genome blastn 865 119 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Variovorax Variovorax paradoxus
4336412 4336412 PRJNA543299_P_NODE_11144_length_224_cov_1.114286_g10987_i0 PRJNA543299 11144 224 1.114286 2.49600064 Candidatus Ichthyocystis hellenicum 1561003 Bacteria Bacteria 107 2.63e-27   NR WP_175330103.1 1561003 g10987 i0 64.9 1.95535714285714 74 26 99.1 0 3 224 9 82 WP_175330103.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Candidatus Ichthyocystis hellenicum] diamond 438 107 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Candidatus Ichthyocystis Candidatus Ichthyocystis hellenicum
4336574 4336574 PRJNA543299_P_NODE_20844_length_167_cov_0.864407_g20687_i0 PRJNA543299 20844 167 0.864407 1.44355969 Bradyrhizobium sp. SK17 2057741 Bacteria Bacteria 178 2.21e-40   NTclustered gi|1304130835|gb|CP025113.1| 2057741 g20687 i0 88.966 0.868263473053892 145 15 87 1 23 167 7111199 7111056 Bradyrhizobium sp. SK17 chromosome, complete genome blastn 145 178 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. SK17
4336575 4336575 PRJNA543299_P_NODE_20864_length_167_cov_0.864407_g20707_i0 PRJNA543299 20864 167 0.864407 1.44355969 Methylorubrum populi 223967 Bacteria Bacteria 180 6.16e-41   NTclustered gi|1024840729|dbj|AP014809.1| 223967 g20707 i0 91.603 8.2814371257485 131 9 78 2 1 131 3237631 3237759 Methylobacterium populi DNA, complete genome blastn 1383 180 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum populi
4336581 4336581 PRJNA543299_P_NODE_21204_length_166_cov_0.871795_g21047_i0 PRJNA543299 21204 166 0.871795 1.4471797 Kofleriaceae bacterium 2212474 Bacteria Bacteria 84.3 1.42e-17   NR MEO7736113.1 2212474 g21047 i0 69.6 4.04819277108434 56 16 99.4 1 166 2 165 220 MEO7736113.1 class I SAM-dependent methyltransferase [Kofleriaceae bacterium] diamond 672 84.3 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
4336597 4336597 PRJNA543299_P_NODE_22144_length_165_cov_0.879310_g21987_i0 PRJNA543299 22144 165 0.87931 1.4508615 Bradyrhizobium sp. SK17 2057741 Bacteria Bacteria 244 2.12e-60   NTclustered gi|1304130835|gb|CP025113.1| 2057741 g21987 i0 93.333 18.7090909090909 165 11 100 0 1 165 1859541 1859377 Bradyrhizobium sp. SK17 chromosome, complete genome blastn 3087 244 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. SK17
4336618 4336618 PRJNA543299_P_NODE_22904_length_164_cov_0.886957_g22747_i0 PRJNA543299 22904 164 0.886957 1.45460948 Brevundimonas olei 657642 Bacteria Bacteria 303 3.42e-78   NTclustered gi|2694694142|gb|CP146369.1| 657642 g22747 i0 100 6 164 0 100 0 1 164 1876102 1876265 Brevundimonas olei strain TRM 44200 chromosome, complete genome blastn 984 303 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas Brevundimonas olei
4336624 4336624 PRJNA543299_P_NODE_23224_length_164_cov_0.886957_g23067_i0 PRJNA543299 23224 164 0.886957 1.45460948 Flavobacterium sp. 239 Bacteria Bacteria 107 1.56e-25   NR WP_396150507.1 239 g23067 i0 96.3 0.98780487804878 54 2 98.8 0 164 3 236 289 WP_396150507.1 carboxypeptidase regulatory-like domain-containing protein [Flavobacterium sp.] diamond 162 107 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
4336660 4336660 PRJNA543299_P_NODE_25224_length_162_cov_0.902655_g25067_i0 PRJNA543299 25224 162 0.902655 1.4623011 Paraburkholderia fungorum 134537 Bacteria Bacteria 126 7.83e-25   NTclustered gi|1865493873|gb|CP028830.1| 134537 g25067 i0 81.935 217.969135802469 155 22 94 6 1 152 104494 104645 Paraburkholderia fungorum strain UM_TBK chromosome 2 blastn 35311 126 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Paraburkholderia Paraburkholderia fungorum
4336670 4336670 PRJNA543299_P_NODE_25804_length_161_cov_0.910714_g25647_i0 PRJNA543299 25804 161 0.910714 1.46624954 Polynucleobacter sp. AP-Elch-400A-B2 2576930 Bacteria Bacteria 154 3.5600000000000004e-33   NTclustered gi|2047868296|gb|CP061317.1| 2576930 g25647 i0 83.851 2.49689440993789 161 26 100 0 1 161 784844 784684 Polynucleobacter sp. AP-Elch-400A-B2 chromosome blastn 402 154 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Polynucleobacter Polynucleobacter sp. AP-Elch-400A-B2
4336676 4336676 PRJNA543299_P_NODE_26024_length_161_cov_0.910714_g25867_i0 PRJNA543299 26024 161 0.910714 1.46624954 Pseudomonadota bacterium 1977087 Bacteria Bacteria 97.8 4.88e-22   NR MEW6598455.1 1977087 g25867 i0 100 0.987577639751553 53 0 98.8 0 159 1 853 905 MEW6598455.1 isoleucine--tRNA ligase [Pseudomonadota bacterium] diamond 159 97.8 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
4336677 4336677 PRJNA543299_P_NODE_26044_length_161_cov_0.910714_g25887_i0 PRJNA543299 26044 161 0.910714 1.46624954 Polynucleobacter corsicus 2081042 Bacteria Bacteria 259 7.34e-65   NTclustered gi|2047859875|gb|CP061314.1| 2081042 g25887 i0 95.652 5.91304347826087 161 7 100 0 1 161 916761 916921 Polynucleobacter corsicus strain AP-Melu-1000-A1 chromosome, complete genome blastn 952 259 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Polynucleobacter Polynucleobacter corsicus
4946799 4946799 PRJNA543299_P_NODE_12844_length_209_cov_0.956250_g12687_i0 PRJNA543299 12844 209 0.95625 1.9985625 Escherichia 561 Bacteria Bacteria 387 4.42e-103   NTclustered gi|2653344983|gb|CP142438.1| 562 g12687 i0 100 100 209 0 100 0 1 209 2576481 2576273 Escherichia coli strain Case 2 chromosome, complete genome blastn 20900 387 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
4946803 4946803 PRJNA543299_P_NODE_19764_length_169_cov_1.150000_g19607_i0 PRJNA543299 19764 169 1.15 1.9435 Enterobacteriaceae 543 Bacteria Bacteria 246 6.03e-61   NTclustered gi|2650988455|gb|CP142548.1| 562 g19607 i0 100 100.372781065089 133 0 98 0 5 137 2914719 2914587 Escherichia coli strain ExPEC_A382 chromosome, complete genome blastn 16963 246 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
4946805 4946805 PRJNA543299_P_NODE_23104_length_164_cov_0.886957_g22947_i0 PRJNA543299 23104 164 0.886957 1.45460948 Bradyrhizobium 374 Bacteria Bacteria 239 9.79e-59   NTclustered gi|2557043072|gb|CP126036.1| 29448 g22947 i0 93.21 96.1768292682927 162 11 99 0 3 164 7007867 7008028 Bradyrhizobium elkanii strain S15H-Be chromosome, complete genome blastn 15773 239 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium elkanii
4946807 4946807 PRJNA543299_P_NODE_24064_length_163_cov_0.894737_g23907_i0 PRJNA543299 24064 163 0.894737 1.45842131 Enterobacteriaceae 543 Bacteria Bacteria 302 1.22e-77   NTclustered gi|2653344983|gb|CP142438.1| 562 g23907 i0 100 100 163 0 100 0 1 163 4389736 4389574 Escherichia coli strain Case 2 chromosome, complete genome blastn 16300 302 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
5613272 5613272 PRJNA543299_P_NODE_12425_length_212_cov_2.184049_g12268_i0 PRJNA543299 12425 212 2.184049 4.63018388 Candidatus Ichthyocystis hellenicum 1561003 Bacteria Bacteria 176 1.06e-39   NTclustered gi|959201724|emb|LN906597.1| 1561003 g12268 i0 83.42 40.5707547169811 193 28 91 4 1 192 850865 851054 bacterium 2013Arg42i genome assembly Ark11, chromosome : I blastn 8601 176 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Candidatus Ichthyocystis Candidatus Ichthyocystis hellenicum
5613386 5613386 PRJNA543299_P_NODE_18865_length_173_cov_1.233871_g18708_i0 PRJNA543299 18865 173 1.233871 2.13459683 Alcaligenaceae 506 Bacteria Bacteria 102 1.06e-23   NR WP_057655463.1 1746199 g18708 i0 94.6 6.84971098265896 56 3 97.1 0 170 3 220 275 WP_057655463.1 type III secretion system ATPase SctN [Bordetella sp. N] diamond 1185 102 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Bordetella Bordetella sp. N
5613415 5613415 PRJNA543299_P_NODE_20525_length_167_cov_0.864407_g20368_i0 PRJNA543299 20525 167 0.864407 1.44355969 Roseateles depolymerans 76731 Bacteria Bacteria 119 1.36e-22   NTclustered gi|971166764|gb|CP013729.1| 76731 g20368 i0 86.792 1.37125748502994 106 14 63 0 57 162 3188952 3189057 Roseateles depolymerans strain KCTC 42856 chromosome, complete genome blastn 229 119 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Roseateles depolymerans
5613422 5613422 PRJNA543299_P_NODE_20865_length_167_cov_0.864407_g20708_i0 PRJNA543299 20865 167 0.864407 1.44355969 Polynucleobacter asymbioticus 576611 Bacteria Bacteria 237 3.599999999999999e-58   NTclustered gi|2047826365|gb|CP061297.1| 576611 g20708 i0 92.216 1 167 13 100 0 1 167 1416067 1415901 Polynucleobacter asymbioticus strain MWH-MoIso1 chromosome, complete genome blastn 167 237 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Polynucleobacter Polynucleobacter asymbioticus
5613438 5613438 PRJNA543299_P_NODE_21765_length_166_cov_0.871795_g21608_i0 PRJNA543299 21765 166 0.871795 1.4471797 Bacteroidota bacterium 1898104 Bacteria Bacteria 104 7.19e-25   NR MEY4521276.1 1898104 g21608 i0 90.9 0.993975903614458 55 5 99.4 0 1 165 209 263 MEY4521276.1 hypothetical protein [Bacteroidota bacterium] diamond 165 104 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
5613454 5613454 PRJNA543299_P_NODE_22945_length_164_cov_0.886957_g22788_i0 PRJNA543299 22945 164 0.886957 1.45460948 Flavobacterium ammoniigenes 1751095 Bacteria Bacteria 220 3.55e-53   NTclustered gi|2119750057|dbj|AP025184.1| 1751095 g22788 i0 91.772 2.40243902439024 158 13 96 0 6 163 2256662 2256505 Flavobacterium ammoniigenes GENT5 DNA, complete genome blastn 394 220 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium ammoniigenes
5613509 5613509 PRJNA543299_P_NODE_25985_length_161_cov_0.910714_g25828_i0 PRJNA543299 25985 161 0.910714 1.46624954 Methylorubrum sp. B1-46 2897334 Bacteria Bacteria 80.5 6.14e-11   NTclustered gi|2161694424|gb|CP088247.1| 2897334 g25828 i0 92.857 0.645962732919255 56 3 35 1 22 77 4451020 4451074 Methylorubrum sp. B1-46 chromosome, complete genome blastn 104 80.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum sp. B1-46
6222255 6222255 PRJNA543299_P_NODE_17785_length_178_cov_1.581395_g17628_i0 PRJNA543299 17785 178 1.581395 2.8148831 Escherichia 561 Bacteria Bacteria 329 6.21e-86   NTclustered gi|2841922414|gb|CP163901.1| 562 g17628 i0 100 100 178 0 100 0 1 178 3757050 3757227 Escherichia coli strain OXEC-129 chromosome, complete genome blastn 17800 329 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
6222256 6222256 PRJNA543299_P_NODE_21405_length_166_cov_0.871795_g21248_i0 PRJNA543299 21405 166 0.871795 1.4471797 Enterobacteriaceae 543 Bacteria Bacteria 307 2.69e-79   NTclustered gi|2650988455|gb|CP142548.1| 562 g21248 i0 100 100 166 0 100 0 1 166 988511 988676 Escherichia coli strain ExPEC_A382 chromosome, complete genome blastn 16600 307 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
6222257 6222257 PRJNA543299_P_NODE_23405_length_164_cov_0.886957_g23248_i0 PRJNA543299 23405 164 0.886957 1.45460948 Methylobacteriaceae 119045 Bacteria Bacteria 303 3.42e-78   NTclustered gi|2206107333|gb|CP092848.1| 410 g23248 i0 100 8.98780487804878 164 0 100 0 1 164 2079594 2079757 Methylobacterium organophilum strain WPA_B chromosome, complete genome blastn 1474 303 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium organophilum
6222258 6222258 PRJNA543299_P_NODE_24185_length_163_cov_0.894737_g24028_i0 PRJNA543299 24185 163 0.894737 1.45842131 Stenotrophomonas 40323 Bacteria Bacteria 302 1.22e-77   NTclustered gi|1944406984|gb|CP056088.1| 40324 g24028 i0 100 100.349693251534 163 0 100 0 1 163 2144329 2144167 Stenotrophomonas maltophilia strain Oak Ridge strain 02 chromosome blastn 16357 302 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas Stenotrophomonas maltophilia
6222262 6222262 PRJNA543299_P_NODE_765_length_726_cov_7.000000_g655_i0 PRJNA543299 765 726 7 50.82 Aeromonas 642 Bacteria Bacteria 1214 0   NTclustered gi|2489111887|gb|CP121848.1| 654 g655 i0 96.836 809.585399449036 727 21 100 2 1 726 2200776 2201501 Aeromonas veronii strain ANYA 14430 chromosome, complete genome blastn 587759 1214 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Aeromonadales Aeromonadaceae Aeromonas Aeromonas veronii
6887154 6887154 PRJNA543299_P_NODE_15746_length_189_cov_1.442857_g15589_i0 PRJNA543299 15746 189 1.442857 2.72699973 Aquipseudomonas alcaligenes 43263 Bacteria Bacteria 339 1.11e-88   NTclustered gi|1958576591|dbj|AP024354.1| 43263 g15589 i0 98.942 377.042328042328 189 2 100 0 1 189 722818 722630 Pseudomonas alcaligenes KAM426 DNA, complete genome blastn 71261 339 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Aquipseudomonas Aquipseudomonas alcaligenes
6887207 6887207 PRJNA543299_P_NODE_19026_length_172_cov_1.609756_g18869_i0 PRJNA543299 19026 172 1.609756 2.76878032 Flavobacterium ammonificans 1751056 Bacteria Bacteria 241 2.87e-59   NTclustered gi|2119752067|dbj|AP025185.1| 1751056 g18869 i0 91.86 2 172 14 100 0 1 172 810237 810408 Flavobacterium ammonificans SHINM13 DNA, complete genome blastn 344 241 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium ammonificans
6887221 6887221 PRJNA543299_P_NODE_19906_length_168_cov_1.521008_g19749_i0 PRJNA543299 19906 168 1.521008 2.55529344 Sphingomonas kaistensis 298708 Bacteria Bacteria 287 3.55e-73   NTclustered gi|2688290521|gb|CP145607.1| 298708 g19749 i0 97.605 164.178571428571 167 4 99 0 1 167 852780 852614 Sphingomonas kaistensis strain MA4R chromosome, complete genome blastn 27582 287 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas kaistensis
6887264 6887264 PRJNA543299_P_NODE_22086_length_165_cov_0.879310_g21929_i0 PRJNA543299 22086 165 0.87931 1.4508615 Polynucleobacter sp. Adler-ghost 2770234 Bacteria Bacteria 300 4.46e-77   NTclustered gi|2047883061|gb|CP061320.1| 2770234 g21929 i0 99.394 11.6484848484848 165 1 100 0 1 165 1284501 1284665 Polynucleobacter sp. Adler-ghost chromosome blastn 1922 300 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Polynucleobacter Polynucleobacter sp. Adler-ghost
6887292 6887292 PRJNA543299_P_NODE_23406_length_164_cov_0.886957_g23249_i0 PRJNA543299 23406 164 0.886957 1.45460948 Bradyrhizobium sp. SK17 2057741 Bacteria Bacteria 265 1.6199999999999998e-66   NTclustered gi|1304130835|gb|CP025113.1| 2057741 g23249 i0 96.273 96.280487804878 161 6 98 0 1 161 3028238 3028398 Bradyrhizobium sp. SK17 chromosome, complete genome blastn 15790 265 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. SK17
6887305 6887305 PRJNA543299_P_NODE_24126_length_163_cov_0.894737_g23969_i0 PRJNA543299 24126 163 0.894737 1.45842131 Agrobacterium tumefaciens 358 Bacteria Bacteria 115 1.7100000000000003e-21   NTclustered gi|2313187592|gb|CP048540.1| 358 g23969 i0 94.595 26.6993865030675 74 4 45 0 3 76 686282 686209 Agrobacterium tumefaciens strain SJ002 chromosome circular, complete sequence blastn 4352 115 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Agrobacterium Agrobacterium tumefaciens
6887310 6887310 PRJNA543299_P_NODE_24446_length_163_cov_0.894737_g24289_i0 PRJNA543299 24446 163 0.894737 1.45842131 Acinetobacter schindleri 108981 Bacteria Bacteria 300 4.39e-77   NTclustered gi|2637608582|gb|CP140481.1| 108981 g24289 i0 100 11.920245398773 162 0 99 0 1 162 2150302 2150463 Acinetobacter schindleri strain RNC-3 chromosome blastn 1943 300 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter schindleri
6887312 6887312 PRJNA543299_P_NODE_24486_length_163_cov_0.877193_g24329_i0 PRJNA543299 24486 163 0.877193 1.42982459 Candidatus Brevundimonas colombiensis 3121376 Bacteria Bacteria 224 2.72e-54   NTclustered gi|2457511348|gb|CP119326.1| 3121376 g24329 i0 91.411 2.17791411042945 163 14 100 0 1 163 2394780 2394942 MAG: Candidatus Brevundimonas colombiensis isolate MAG_833 chromosome, complete genome blastn 355 224 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas Candidatus Brevundimonas colombiensis
6887416 6887416 PRJNA543299_P_NODE_7926_length_263_cov_0.953271_g7769_i0 PRJNA543299 7926 263 0.953271 2.50710273 Flavobacterium ammonificans 1751056 Bacteria Bacteria 418 2.0499999999999995e-112   NTclustered gi|2119752067|dbj|AP025185.1| 1751056 g7769 i0 96.094 4.95057034220532 256 10 97 0 1 256 747397 747652 Flavobacterium ammonificans SHINM13 DNA, complete genome blastn 1302 418 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium ammonificans
7496777 7496777 PRJNA543299_P_NODE_12966_length_208_cov_0.962264_g12809_i0 PRJNA543299 12966 208 0.962264 2.00150912 Enterobacteriaceae 543 Bacteria Bacteria 385 1.58e-102   NTclustered gi|2650988455|gb|CP142548.1| 562 g12809 i0 100 100 208 0 100 0 1 208 2037485 2037692 Escherichia coli strain ExPEC_A382 chromosome, complete genome blastn 20800 385 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
7496778 7496778 PRJNA543299_P_NODE_13866_length_201_cov_1.342105_g13709_i0 PRJNA543299 13866 201 1.342105 2.69763105 Enterobacteriaceae 543 Bacteria Bacteria 372 1.18e-98   NTclustered gi|2650988455|gb|CP142548.1| 562 g13709 i0 100 100 201 0 100 0 1 201 394313 394113 Escherichia coli strain ExPEC_A382 chromosome, complete genome blastn 20100 372 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
7496781 7496781 PRJNA543299_P_NODE_18846_length_173_cov_1.233871_g18689_i0 PRJNA543299 18846 173 1.233871 2.13459683 Enterobacteriaceae 543 Bacteria Bacteria 320 3.61e-83   NTclustered gi|2161252967|gb|CP088071.1| 562 g18689 i0 100 100 173 0 100 0 1 173 4957319 4957147 Escherichia coli strain 427603 chromosome, complete genome blastn 17300 320 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
7496784 7496784 PRJNA543299_P_NODE_23246_length_164_cov_0.886957_g23089_i0 PRJNA543299 23246 164 0.886957 1.45460948 Escherichia 561 Bacteria Bacteria 298 1.59e-76   NTclustered gi|2653344983|gb|CP142438.1| 562 g23089 i0 99.39 100 164 1 100 0 1 164 939916 939753 Escherichia coli strain Case 2 chromosome, complete genome blastn 16400 298 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
7496785 7496785 PRJNA543299_P_NODE_23326_length_164_cov_0.886957_g23169_i0 PRJNA543299 23326 164 0.886957 1.45460948 Enterobacteriaceae 543 Bacteria Bacteria 303 3.42e-78   NTclustered gi|2653344983|gb|CP142438.1| 562 g23169 i0 100 100 164 0 100 0 1 164 529955 529792 Escherichia coli strain Case 2 chromosome, complete genome blastn 16400 303 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
7496786 7496786 PRJNA543299_P_NODE_24226_length_163_cov_0.894737_g24069_i0 PRJNA543299 24226 163 0.894737 1.45842131 Comamonadaceae 80864 Bacteria Bacteria 113 6.14e-21   NTclustered gi|1373249612|gb|CP028292.1| 80867 g24069 i0 86.408 14.6441717791411 103 14 63 0 51 153 691039 690937 Paracidovorax avenae strain INDB2 chromosome blastn 2387 113 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Paracidovorax Paracidovorax avenae
7496790 7496790 PRJNA543299_P_NODE_8726_length_251_cov_2.955446_g8569_i0 PRJNA543299 8726 251 2.955446 7.41816946 Shewanella 22 Bacteria Bacteria 464 2.47e-126   NTclustered gi|117610791|gb|CP000469.1| 94122 g8569 i0 100 808.147410358566 251 0 100 0 1 251 4477423 4477673 Shewanella sp. ANA-3 chromosome 1, complete sequence blastn 202845 464 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Shewanellaceae Shewanella Shewanella sp. ANA-3
8162242 8162242 PRJNA543299_P_NODE_12347_length_213_cov_1.231707_g12190_i0 PRJNA543299 12347 213 1.231707 2.62353591 Candidatus Ichthyocystis 2929841 Bacteria Bacteria 125 4.69e-34   NR WP_092402830.1 2929841 g12190 i0 87.1 1.97183098591549 70 9 98.6 0 2 211 109 178 WP_092402830.1 MULTISPECIES: response regulator transcription factor [Candidatus Ichthyocystis] diamond 420 125 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Candidatus Ichthyocystis  
8162291 8162291 PRJNA543299_P_NODE_1487_length_554_cov_3.257426_g1346_i0 PRJNA543299 1487 554 3.257426 18.04614004 Chitinimonas koreensis 356302 Bacteria Bacteria 887 0   NTclustered gi|1898132335|gb|CP060704.1| 356302 g1346 i0 95.512 299.994584837545 557 21 100 3 1 554 645102 645657 Chitinimonas koreensis strain R2A43-10 chromosome, complete genome blastn 166197 887 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Neisseriales Chitinibacteraceae Chitinimonas Chitinimonas koreensis
8162404 8162404 PRJNA543299_P_NODE_21627_length_166_cov_0.871795_g21470_i0 PRJNA543299 21627 166 0.871795 1.4471797 Bradyrhizobium sp. SK17 2057741 Bacteria Bacteria 254 3.55e-63   NTclustered gi|1304130835|gb|CP025113.1| 2057741 g21470 i0 94.512 49.7710843373494 164 9 99 0 3 166 2504001 2504164 Bradyrhizobium sp. SK17 chromosome, complete genome blastn 8262 254 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. SK17
8162406 8162406 PRJNA543299_P_NODE_21687_length_166_cov_0.871795_g21530_i0 PRJNA543299 21687 166 0.871795 1.4471797 Bradyrhizobium sp. SK17 2057741 Bacteria Bacteria 113 6.290000000000001e-21   NTclustered gi|1304130835|gb|CP025113.1| 2057741 g21530 i0 79.29 4.63855421686747 169 30 100 5 1 166 1081868 1081702 Bradyrhizobium sp. SK17 chromosome, complete genome blastn 770 113 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. SK17
8162416 8162416 PRJNA543299_P_NODE_22227_length_165_cov_0.879310_g22070_i0 PRJNA543299 22227 165 0.87931 1.4508615 Betaproteobacteria 28216 Bacteria Bacteria 95.1 3.11e-21   NR MDQ5886866.1 1977087 g22070 i0 87 13.7454545454545 54 7 98.2 0 3 164 130 183 MDQ5886866.1 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [Pseudomonadota bacterium] diamond 2268 95.9 0.991657977059437 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
8162421 8162421 PRJNA543299_P_NODE_22507_length_165_cov_0.879310_g22350_i0 PRJNA543299 22507 165 0.87931 1.4508615 Flavobacterium ammonificans 1751056 Bacteria Bacteria 172 1.02e-38   NTclustered gi|2119748049|dbj|AP025183.1| 1751056 g22350 i0 87.417 75.7333333333333 151 17 91 2 16 165 775565 775714 Flavobacterium ammonificans GENT11 DNA, complete genome blastn 12496 172 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium ammonificans
8162437 8162437 PRJNA543299_P_NODE_23407_length_164_cov_0.886957_g23250_i0 PRJNA543299 23407 164 0.886957 1.45460948 Bradyrhizobium sp. PSBB068 2715960 Bacteria Bacteria 302 1.23e-77   NTclustered gi|1979381481|gb|CP069300.1| 2715960 g23250 i0 100 97.8231707317073 163 0 99 0 1 163 4511728 4511890 Bradyrhizobium sp. PSBB068 chromosome, complete genome blastn 16043 302 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. PSBB068
8771654 8771654 PRJNA543299_P_NODE_10487_length_230_cov_2.337017_g10330_i0 PRJNA543299 10487 230 2.337017 5.3751391 root 1 Root_unresolved Root_unresolved 425 1.05e-114   NTclustered gi|2105994915|gb|CP084298.1| 470 g10330 i0 100 100 230 0 100 0 1 230 35490 35719 Acinetobacter baumannii strain LHC22-2 plasmid pLHC22-2-tetX-162k, complete sequence blastn 23000 425 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter baumannii
8771657 8771657 PRJNA543299_P_NODE_22627_length_165_cov_0.870690_g22470_i0 PRJNA543299 22627 165 0.87069 1.4366385 Enterobacteriaceae 543 Bacteria Bacteria 289 9.66e-74   NTclustered gi|2211724983|gb|CP066839.1| 562 g22470 i0 98.182 100 165 3 100 0 1 165 3702381 3702545 Escherichia coli strain Ec-RL2-1X chromosome, complete genome blastn 16500 289 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
8771658 8771658 PRJNA543299_P_NODE_23907_length_163_cov_0.894737_g23750_i0 PRJNA543299 23907 163 0.894737 1.45842131 Escherichia 561 Bacteria Bacteria 302 1.22e-77   NTclustered gi|2653344983|gb|CP142438.1| 562 g23750 i0 100 100 163 0 100 0 1 163 1839719 1839557 Escherichia coli strain Case 2 chromosome, complete genome blastn 16300 302 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
8771659 8771659 PRJNA543299_P_NODE_26247_length_161_cov_0.910714_g26090_i0 PRJNA543299 26247 161 0.910714 1.46624954 Bradyrhizobium 374 Bacteria Bacteria 243 7.39e-60   NTclustered gi|2557098553|gb|CP126012.1| 375 g26090 i0 93.789 56.3291925465838 161 10 100 0 1 161 10113 9953 Bradyrhizobium japonicum strain N03G-Bj plasmid pN03G-2, complete sequence blastn 9069 243 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium japonicum
8771661 8771661 PRJNA543299_P_NODE_26707_length_156_cov_3.233645_g26550_i0 PRJNA543299 26707 156 3.233645 5.0444862 Bacteroidota 976 Bacteria Bacteria 289 9e-74   NTclustered gi|1321370318|gb|MG758023.1| 239 g26550 i0 100 118 156 0 100 0 1 156 1345 1190 Flavobacterium sp. strain M4_13 16S ribosomal RNA gene, partial sequence blastn 18408 289 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
9437808 9437808 PRJNA543299_P_NODE_17568_length_179_cov_1.569231_g17411_i0 PRJNA543299 17568 179 1.569231 2.80892349 Bradyrhizobium sp. PSBB068 2715960 Bacteria Bacteria 331 1.74e-86   NTclustered gi|1979381481|gb|CP069300.1| 2715960 g17411 i0 100 45.1396648044693 179 0 100 0 1 179 4981138 4980960 Bradyrhizobium sp. PSBB068 chromosome, complete genome blastn 8080 331 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. PSBB068
9437862 9437862 PRJNA543299_P_NODE_21228_length_166_cov_0.871795_g21071_i0 PRJNA543299 21228 166 0.871795 1.4471797 Bradyrhizobium sp. BTAi1 288000 Bacteria Bacteria 307 2.69e-79   NTclustered gi|146403799|gb|CP000494.1| 288000 g21071 i0 100 1 166 0 100 0 1 166 8193249 8193084 Bradyrhizobium sp. BTAi1, complete genome blastn 166 307 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. BTAi1
9437877 9437877 PRJNA543299_P_NODE_21788_length_166_cov_0.871795_g21631_i0 PRJNA543299 21788 166 0.871795 1.4471797 Paragemmobacter aquarius 2169400 Bacteria Bacteria 195 2.18e-45   NTclustered gi|1379398757|gb|CP028921.1| 2169400 g21631 i0 90 1.63855421686747 150 15 90 0 17 166 12918 12769 Gemmobacter aquarius strain HYN0069 plasmid unnamed3, complete sequence blastn 272 195 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Paragemmobacter Paragemmobacter aquarius
9437883 9437883 PRJNA543299_P_NODE_22088_length_165_cov_0.879310_g21931_i0 PRJNA543299 22088 165 0.87931 1.4508615 Niabella soli 446683 Bacteria Bacteria 267 4.53e-67   NTclustered gi|570743502|gb|CP007035.1| 929713 g21931 i0 95.758 314.333333333333 165 7 100 0 1 165 2225502 2225666 Niabella soli DSM 19437, complete genome blastn 51865 267 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Niabella Niabella soli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;