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contig_metadata

7 rows where bioproject = "PRJNA543299" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA543299 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1784934 1784934 PRJNA543299_P_NODE_15122_length_193_cov_1.159722_g14965_i0 PRJNA543299 15122 193 1.159722 2.23826346 Encyonema minutum 431330 SAR_Eukaryotes SAR_Eukaryotes 357 3.1499999999999996e-94   NTclustered gi|168145881|emb|AM710515.1| 431330 g14965 i0 100 89.6787564766839 193 0 100 0 1 193 18 210 Encyonema minutum partial 28S rRNA gene, strain AT-137.13 blastn 17308 357 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Cymbellales Cymbellaceae Encyonema Encyonema minutum
18361165 18361165 PRJNA543299_P_NODE_21335_length_166_cov_0.871795_g21178_i0 PRJNA543299 21335 166 0.871795 1.4471797 Eimeria praecox 51316 SAR_Eukaryotes SAR_Eukaryotes 274 2.73e-69   NTclustered gi|2638822883|emb|OY986962.1| 51316 g21178 i0 96.407 151.186746987952 167 4 100 2 1 166 24407 24242 Eimeria praecox genome assembly, organelle: plastid:chloroplast blastn 25097 274 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria praecox
18970189 18970189 PRJNA543299_P_NODE_8835_length_250_cov_1.218905_g8678_i0 PRJNA543299 8835 250 1.218905 3.0472625 Encyonema 216746 SAR_Eukaryotes SAR_Eukaryotes 449 6.87e-122   NTclustered gi|168145699|emb|AM501961.1| 431330 g8678 i0 99.197 99.612 249 2 99 0 1 249 109 357 Encyonema minutum 18S rRNA gene, strain AT-137.13 blastn 24903 449 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Cymbellales Cymbellaceae Encyonema Encyonema minutum
19635575 19635575 PRJNA543299_P_NODE_11316_length_222_cov_1.167630_g11159_i0 PRJNA543299 11316 222 1.16763 2.5921386 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 411 2.8199999999999996e-110   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g11159 i0 100 42.0405405405405 222 0 100 0 1 222 366 145 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 9333 411 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
23461774 23461774 PRJNA543299_P_NODE_16279_length_186_cov_1.642336_g16122_i0 PRJNA543299 16279 186 1.642336 3.05474496 Epicarchesium granulatum 3242921 SAR_Eukaryotes SAR_Eukaryotes 339 1.0899999999999998e-88   NTclustered gi|2788414624|gb|PQ195591.1| 3242921 g16122 i0 99.459 99.0645161290323 185 1 99 0 1 185 92 276 Epicarchesium granulatum isolate WT2021061001 large subunit ribosomal RNA gene, partial sequence blastn 18426 339 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Epicarchesium Epicarchesium granulatum
24735536 24735536 PRJNA543299_P_NODE_18840_length_173_cov_1.233871_g18683_i0 PRJNA543299 18840 173 1.233871 2.13459683 Atoxoplasma sp. MS-2003 241650 SAR_Eukaryotes SAR_Eukaryotes 169 1.38e-37   NTclustered gi|34923210|gb|AY283857.1| 241650 g18683 i0 91.2 69.5433526011561 125 9 72 1 49 173 1321 1443 Atoxoplasma sp. MS-2003 large subunit ribosomal RNA gene, partial sequence blastn 12031 169 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Atoxoplasma Atoxoplasma sp. MS-2003
25344969 25344969 PRJNA543299_P_NODE_19440_length_170_cov_1.669421_g19283_i0 PRJNA543299 19440 170 1.669421 2.8380157 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 315 1.64e-81   NTclustered gi|10782|emb|X54004.1| 5908 g19283 i0 100 90.8352941176471 170 0 100 0 1 170 2969 3138 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 15442 315 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;