RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA543299", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA543299 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17087034 17087034 PRJNA543299_P_NODE_15034_length_193_cov_10.604167_g14877_i0 PRJNA543299 15034 193 10.604167 20.46604231 root 1 Root_unresolved Root_unresolved 95.1 6.66e-21   NR XP_031570871.1 6105 g14877 i0 66.7 225.233160621762 63 21 97.9 0 3 191 562 624 XP_031570871.1 serine/threonine-protein kinase A-Raf-like isoform X1 [Actinia tenebrosa] diamond 43470 95.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
29524341 29524341 PRJNA543299_P_NODE_7470_length_270_cov_20.312217_g7313_i0 PRJNA543299 7470 270 20.312217 54.8429859 Metazoa 33208 Cnidaria other_Eukaryota 57 5.09e-7   NR XP_066918441.1 252671 g7313 i0 60.5 3.51111111111111 43 17 47.8 0 142 270 521 563 XP_066918441.1 serine/threonine-protein kinase A-Raf-like isoform X1 [Clytia hemisphaerica] diamond 948 57 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;