RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA543299", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Kaiseribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kaiseribacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA543299 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11988394 11988394 PRJNA543299_P_NODE_22530_length_165_cov_0.879310_g22373_i0 PRJNA543299 22530 165 0.87931 1.4508615 Bacteria 2 Bacteria Bacteria 100 2.7699999999999996e-23   NR OGG49618.1 1798482 g22373 i0 83.3 6.87272727272727 54 9 98.2 0 3 164 257 310 OGG49618.1 MAG: histidine--tRNA ligase [Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36] diamond 1134 101 0.99009900990099 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36
30661461 30661461 PRJNA543299_P_NODE_26153_length_161_cov_0.910714_g25996_i0 PRJNA543299 26153 161 0.910714 1.46624954 Bacteria 2 Bacteria Bacteria 89.7 2.9e-19   NR PIR84932.1 1974608 g25996 i0 89.8 13.9192546583851 49 5 91.3 0 147 1 132 180 PIR84932.1 MAG: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Candidatus Kaiserbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_47_16] diamond 2241 90.1 0.995560488346282 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_47_16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;