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contig_metadata

34 rows where bioproject = "PRJNA543299" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 34 ✖

bioproject 1

  • PRJNA543299 · 34 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
509734 509734 PRJNA543299_P_NODE_26121_length_161_cov_0.910714_g25964_i0 PRJNA543299 26121 161 0.910714 1.46624954 Bacteria 2 Bacteria Bacteria 99.8 1.0300000000000001e-22   NR MDE1974938.1 2052139 g25964 i0 86.8 1.95652173913043 53 7 98.8 0 160 2 481 533 MDE1974938.1 DNA polymerase III subunit alpha [Patescibacteria group bacterium] diamond 315 100 0.998 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
11988394 11988394 PRJNA543299_P_NODE_22530_length_165_cov_0.879310_g22373_i0 PRJNA543299 22530 165 0.87931 1.4508615 Bacteria 2 Bacteria Bacteria 100 2.7699999999999996e-23   NR OGG49618.1 1798482 g22373 i0 83.3 6.87272727272727 54 9 98.2 0 3 164 257 310 OGG49618.1 MAG: histidine--tRNA ligase [Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36] diamond 1134 101 0.99009900990099 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36
26793120 26793120 PRJNA543299_P_NODE_23381_length_164_cov_0.886957_g23224_i0 PRJNA543299 23381 164 0.886957 1.45460948 Minisyncoccota bacterium 2053589 Bacteria Bacteria 91.7 7.45e-20   NR HEX8993695.1 2053589 g23224 i0 85.2 0.98780487804878 54 8 98.8 0 1 162 259 312 HEX8993695.1 efflux RND transporter permease subunit [Candidatus Paceibacterota bacterium] diamond 162 91.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26919750 26919750 PRJNA543299_P_NODE_22282_length_165_cov_0.879310_g22125_i0 PRJNA543299 22282 165 0.87931 1.4508615 Patescibacteria group bacterium 2052139 Bacteria Bacteria 57.8 6.33e-8   NR MDB4984525.1 2052139 g22125 i0 50.9 1 55 27 100 0 1 165 228 282 MDB4984525.1 seg [Patescibacteria group bacterium] diamond 165 57.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27014556 27014556 PRJNA543299_P_NODE_22062_length_165_cov_0.879310_g21905_i0 PRJNA543299 22062 165 0.87931 1.4508615 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 57.4 9.06e-8   NR HEY5268411.1 2973664 g21905 i0 47.3 1 55 29 100 0 165 1 671 725 HEY5268411.1 baseplate J/gp47 family protein [Candidatus Saccharimonadales bacterium] diamond 165 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27077900 27077900 PRJNA543299_P_NODE_20802_length_167_cov_0.864407_g20645_i0 PRJNA543299 20802 167 0.864407 1.44355969 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 45.4 0.0015   NR RTL04780.1 2030827 g20645 i0 48 0.898203592814371 50 26 89.8 0 3 152 667 716 RTL04780.1 MAG: hypothetical protein EKK58_09680 [Candidatus Dependentiae bacterium] diamond 150 45.4 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
27457308 27457308 PRJNA543299_P_NODE_25623_length_161_cov_0.910714_g25466_i0 PRJNA543299 25623 161 0.910714 1.46624954 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 90.1 4.46e-20   NR MBX4201254.1 2762014 g25466 i0 88.7 0.987577639751553 53 6 98.8 0 161 3 66 118 MBX4201254.1 SIMPL domain-containing protein [Candidatus Parcubacteria bacterium] diamond 159 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27630014 27630014 PRJNA543299_P_NODE_21704_length_166_cov_0.871795_g21547_i0 PRJNA543299 21704 166 0.871795 1.4471797 Bacteria 2 Bacteria Bacteria 67.4 2.28e-11   NR MEI8249318.1 2052153 g21547 i0 75.6 1.55421686746988 41 10 74.1 0 124 2 2 42 MEI8249318.1 ATP phosphoribosyltransferase regulatory subunit [Candidatus Taylorbacteria bacterium] diamond 258 67.4 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
27710165 27710165 PRJNA543299_P_NODE_24344_length_163_cov_0.894737_g24187_i0 PRJNA543299 24344 163 0.894737 1.45842131 Patescibacteria group bacterium 2052139 Bacteria Bacteria 96.7 2.77e-22   NR MDB4983859.1 2052139 g24187 i0 88.7 0.975460122699387 53 6 97.5 0 5 163 112 164 MDB4983859.1 obgE [Patescibacteria group bacterium] diamond 159 96.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28088480 28088480 PRJNA543299_P_NODE_21205_length_166_cov_0.871795_g21048_i0 PRJNA543299 21205 166 0.871795 1.4471797 Minisyncoccota bacterium 2053589 Bacteria Bacteria 60.1 3.02e-9   NR MDI9407625.1 2053589 g21048 i0 62.7 0.921686746987952 51 15 92.2 1 6 158 94 140 MDI9407625.1 ERF family protein [Candidatus Paceibacterota bacterium] diamond 153 60.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28593881 28593881 PRJNA543299_P_NODE_22207_length_165_cov_0.879310_g22050_i0 PRJNA543299 22207 165 0.87931 1.4508615 Patescibacteria group bacterium 2052139 Bacteria Bacteria 75.1 5.16e-14   NR MEK7551910.1 2052139 g22050 i0 69.1 2 55 17 100 0 1 165 46 100 MEK7551910.1 PEP/pyruvate-binding domain-containing protein [Patescibacteria group bacterium] diamond 330 75.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28720161 28720161 PRJNA543299_P_NODE_20447_length_167_cov_0.864407_g20290_i0 PRJNA543299 20447 167 0.864407 1.44355969 Candidatus Zambryskiibacteriota bacterium 2053652 Bacteria Bacteria 78.2 3.44e-15   NR MCX6703550.1 2053652 g20290 i0 63.6 4.92215568862275 55 20 98.8 0 166 2 68 122 MCX6703550.1 cell division protein FtsA [Candidatus Zambryskiibacteriota bacterium] diamond 822 78.2 1 Bacteria Bacteria candidate phyla   Candidatus Zambryskiibacteriota         Candidatus Zambryskiibacteriota bacterium
28797873 28797873 PRJNA543299_P_NODE_23127_length_164_cov_0.886957_g22970_i0 PRJNA543299 23127 164 0.886957 1.45460948 Bacteria 2 Bacteria Bacteria 88.2 3.92e-19   NR HEY0907984.1 2053589 g22970 i0 72.2 1.97560975609756 54 15 98.8 0 162 1 74 127 HEY0907984.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 324 88.6 0.99548532731377 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28972793 28972793 PRJNA543299_P_NODE_26208_length_161_cov_0.910714_g26051_i0 PRJNA543299 26208 161 0.910714 1.46624954 Patescibacteria group bacterium 2052139 Bacteria Bacteria 59.3 1.72e-8   NR MEK7068256.1 2052139 g26051 i0 50.9 0.987577639751553 53 26 98.8 0 3 161 264 316 MEK7068256.1 hypothetical protein [Patescibacteria group bacterium] diamond 159 59.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29225527 29225527 PRJNA543299_P_NODE_24929_length_162_cov_0.902655_g24772_i0 PRJNA543299 24929 162 0.902655 1.4623011 Minisyncoccota bacterium 2053589 Bacteria Bacteria 41.6 0.0298   NR MDD5164994.1 2053589 g24772 i0 52 0.462962962962963 25 12 46.3 0 3 77 208 232 MDD5164994.1 LamG domain-containing protein [Candidatus Paceibacterota bacterium] diamond 75 41.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29256584 29256584 PRJNA543299_P_NODE_24269_length_163_cov_0.894737_g24112_i0 PRJNA543299 24269 163 0.894737 1.45842131 Patescibacteria group bacterium 2052139 Bacteria Bacteria 67.8 9.63e-12   NR MES2060035.1 2052139 g24112 i0 82.5 1.49079754601227 40 7 73.6 0 124 5 1 40 MES2060035.1 hypothetical protein [Patescibacteria group bacterium] diamond 243 67.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29477550 29477550 PRJNA543299_P_NODE_21410_length_166_cov_0.871795_g21253_i0 PRJNA543299 21410 166 0.871795 1.4471797 Minisyncoccota bacterium 2053589 Bacteria Bacteria 101 2.1599999999999998e-23   NR HVY35909.1 2053589 g21253 i0 85.5 1.98795180722892 55 8 99.4 0 166 2 224 278 HVY35909.1 amino acid--tRNA ligase-related protein [Candidatus Paceibacterota bacterium] diamond 330 101 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29635362 29635362 PRJNA543299_P_NODE_25790_length_161_cov_0.910714_g25633_i0 PRJNA543299 25790 161 0.910714 1.46624954 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 97.1 5.2599999999999997e-23   NR MBP6913784.1 2052151 g25633 i0 94.3 0.987577639751553 53 3 98.8 0 3 161 69 121 MBP6913784.1 ParB/RepB/Spo0J family partition protein [Candidatus Levyibacteriota bacterium] diamond 159 97.1 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
29730200 29730200 PRJNA543299_P_NODE_25210_length_162_cov_0.902655_g25053_i0 PRJNA543299 25210 162 0.902655 1.4623011 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 43.5 0.00586   NR HAM57331.1 2053607 g25053 i0 46.8 1.74074074074074 47 25 87 0 14 154 82 128 HAM57331.1 hypothetical protein [Candidatus Rokuibacteriota bacterium] diamond 282 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
29888499 29888499 PRJNA543299_P_NODE_23191_length_164_cov_0.886957_g23034_i0 PRJNA543299 23191 164 0.886957 1.45460948 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 58.2 1.4e-8   NR MCR4329589.1 2282149 g23034 i0 51 0.932926829268293 51 25 93.3 0 4 156 76 126 MCR4329589.1 hypothetical protein [Candidatus Roizmanbacteria bacterium] diamond 153 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
29888500 29888500 PRJNA543299_P_NODE_25771_length_161_cov_0.910714_g25614_i0 PRJNA543299 25771 161 0.910714 1.46624954 Patescibacteria group bacterium 2052139 Bacteria Bacteria 96.7 5.32e-22   NR HEY1074890.1 2052139 g25614 i0 88.7 0.987577639751553 53 6 98.8 0 1 159 252 304 HEY1074890.1 HAD-IC family P-type ATPase [Patescibacteria group bacterium] diamond 159 96.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30235859 30235859 PRJNA543299_P_NODE_22372_length_165_cov_0.879310_g22215_i0 PRJNA543299 22372 165 0.87931 1.4508615 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 84 3.68e-17   NR TXG78462.1 2099670 g22215 i0 78.3 0.836363636363636 46 10 83.6 0 140 3 16 61 TXG78462.1 MAG: hypothetical protein E6Q11_00965 [Candidatus Dojkabacteria bacterium] diamond 138 84 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
30394305 30394305 PRJNA543299_P_NODE_24913_length_162_cov_0.902655_g24756_i0 PRJNA543299 24913 162 0.902655 1.4623011 Minisyncoccota bacterium 2053589 Bacteria Bacteria 85.9 1.07e-19   NR MFA5387739.1 2053589 g24756 i0 75.5 2.94444444444444 53 13 98.1 0 159 1 24 76 MFA5387739.1 M15 family metallopeptidase [Candidatus Paceibacterota bacterium] diamond 477 85.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30661461 30661461 PRJNA543299_P_NODE_26153_length_161_cov_0.910714_g25996_i0 PRJNA543299 26153 161 0.910714 1.46624954 Bacteria 2 Bacteria Bacteria 89.7 2.9e-19   NR PIR84932.1 1974608 g25996 i0 89.8 13.9192546583851 49 5 91.3 0 147 1 132 180 PIR84932.1 MAG: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Candidatus Kaiserbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_47_16] diamond 2241 90.1 0.995560488346282 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_47_16
31500173 31500173 PRJNA543299_P_NODE_18256_length_176_cov_1.204724_g18099_i0 PRJNA543299 18256 176 1.204724 2.12031424 Patescibacteria group bacterium 2052139 Bacteria Bacteria 71.2 1.33e-12   NR MDE2031363.1 2052139 g18099 i0 56.9 1.90909090909091 58 24 98.9 1 2 175 519 575 MDE2031363.1 hypothetical protein [Patescibacteria group bacterium] diamond 336 71.2 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31531796 31531796 PRJNA543299_P_NODE_24036_length_163_cov_0.894737_g23879_i0 PRJNA543299 24036 163 0.894737 1.45842131 Patescibacteria group bacterium 2052139 Bacteria Bacteria 85.5 1.09e-17   NR MDE2031410.1 2052139 g23879 i0 66.7 0.993865030674847 54 18 99.4 0 162 1 27 80 MDE2031410.1 hypothetical protein [Patescibacteria group bacterium] diamond 162 85.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31595124 31595124 PRJNA543299_P_NODE_22056_length_165_cov_0.879310_g21899_i0 PRJNA543299 22056 165 0.87931 1.4508615 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 51.2 1.21e-5   NR MEO5499473.1 2973664 g21899 i0 51.9 0.981818181818182 54 25 96.4 1 160 2 162 215 MEO5499473.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 162 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
31657922 31657922 PRJNA543299_P_NODE_16717_length_184_cov_0.992593_g16560_i0 PRJNA543299 16717 184 0.992593 1.82637112 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.1 0.0108   NR MFA5387735.1 2053589 g16560 i0 58.1 0.505434782608696 31 13 50.5 0 2 94 187 217 MFA5387735.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 93 43.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31721397 31721397 PRJNA543299_P_NODE_21737_length_166_cov_0.871795_g21580_i0 PRJNA543299 21737 166 0.871795 1.4471797 Patescibacteria group bacterium 2052139 Bacteria Bacteria 75.5 3.8e-14   NR MFA5029165.1 2052139 g21580 i0 61.8 1.95180722891566 55 21 99.4 0 2 166 125 179 MFA5029165.1 hypothetical protein [Patescibacteria group bacterium] diamond 324 75.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31879387 31879387 PRJNA543299_P_NODE_23017_length_164_cov_0.886957_g22860_i0 PRJNA543299 23017 164 0.886957 1.45460948 Minisyncoccota bacterium 2053589 Bacteria Bacteria 92.8 2.87e-20   NR HWO07563.1 2053589 g22860 i0 85.2 1.97560975609756 54 8 98.8 0 3 164 372 425 HWO07563.1 ABC transporter ATP-binding protein [Candidatus Paceibacterota bacterium] diamond 324 92.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32116028 32116028 PRJNA543299_P_NODE_26038_length_161_cov_0.910714_g25881_i0 PRJNA543299 26038 161 0.910714 1.46624954 Bacteria 2 Bacteria Bacteria 80.5 5.08e-18   NR OGZ54370.1 1802126 g25881 i0 71.7 3.93167701863354 53 15 98.8 0 3 161 11 63 OGZ54370.1 MAG: 50S ribosomal protein L21 [Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26] diamond 633 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Ryaniibacteriota         Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26
32132836 32132836 PRJNA543299_P_NODE_22478_length_165_cov_0.879310_g22321_i0 PRJNA543299 22478 165 0.87931 1.4508615 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 116 1.42e-28   NR MEN9338184.1 2762014 g22321 i0 92.6 5.87272727272727 54 4 98.2 0 3 164 408 461 MEN9338184.1 ribonuclease j1, ribonuclease [Candidatus Parcubacteria bacterium] diamond 969 116 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32132837 32132837 PRJNA543299_P_NODE_24018_length_163_cov_0.894737_g23861_i0 PRJNA543299 24018 163 0.894737 1.45842131 Candidatus Yanofskybacteria bacterium 2052154 Bacteria Bacteria 80.9 4.59e-16   NR MBI4160719.1 2052154 g23861 i0 67.9 5.83435582822086 53 17 97.5 0 162 4 542 594 MBI4160719.1 DUF4430 domain-containing protein [Candidatus Yanofskybacteria bacterium] diamond 951 80.9 1 Bacteria Bacteria candidate phyla   Candidatus Yanofskyibacteriota         Candidatus Yanofskybacteria bacterium
32417563 32417563 PRJNA543299_P_NODE_24139_length_163_cov_0.894737_g23982_i0 PRJNA543299 24139 163 0.894737 1.45842131 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 53.5 1.98e-6   NR MEJ0021488.1 2052150 g23982 i0 54.5 1.01226993865031 55 23 97.5 1 5 163 124 178 MEJ0021488.1 hypothetical protein [Candidatus Doudnabacteria bacterium] diamond 165 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;