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contig_metadata

34 rows where bioproject = "PRJNA541476" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 34 ✖

tax_clade 1

bioproject 1

  • PRJNA541476 · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
508820 508820 PRJNA541476_P_NODE_281_length_1889_cov_6.427863_g235_i0 PRJNA541476 281 1889 6.427863 121.42233207 Bermuda grass latent virus 1930269 Viruses Viruses 3210 0   NTclustered gi|2221822461|gb|MZ671022.1| 1930269 g235 i0 97.352 2.99841185812599 1888 50 99 0 2 1889 4046 2159 Bermuda grass latent virus isolate 5657, complete genome blastn 5664 3210 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Panicovirus Bermuda grass latent virus
1783926 1783926 PRJNA541476_P_NODE_182_length_2213_cov_7.047664_g144_i0 PRJNA541476 182 2213 7.047664 155.96480432 Bermuda grass latent virus 1930269 Viruses Viruses 3616 0   NTclustered gi|1124891108|gb|KX758441.1| 1930269 g144 i0 96.159 4.56032535020334 2213 85 100 0 1 2213 294 2506 Bermuda grass latent virus isolate BGLV, complete genome blastn 10092 3616 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Panicovirus Bermuda grass latent virus
1784037 1784037 PRJNA541476_P_NODE_22582_length_271_cov_3.373737_g22376_i0 PRJNA541476 22582 271 3.373737 9.14282727 Bermuda grass latent virus 1930269 Viruses Viruses 451 2.0999999999999997e-122   NTclustered gi|1124891108|gb|KX758441.1| 1930269 g22376 i0 96.679 2.99630996309963 271 9 100 0 1 271 14 284 Bermuda grass latent virus isolate BGLV, complete genome blastn 812 451 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Panicovirus Bermuda grass latent virus
2393993 2393993 PRJNA541476_P_NODE_1562_length_950_cov_1.457241_g1413_i0 PRJNA541476 1562 950 1.457241 13.8437895 Alphanodavirus 143920 Viruses Viruses 1528 0   NTclustered gi|2756421730|gb|PP744796.1| 2809137 g1413 i0 95.684 2.00105263157895 950 41 100 0 1 950 1712 763 MAG: Alphanodavirus sp. isolate 031_127 genomic sequence blastn 1901 1528 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus sp.
3059556 3059556 PRJNA541476_P_NODE_24103_length_266_cov_1.518135_g23897_i0 PRJNA541476 24103 266 1.518135 4.0382391 Prokaryotic dsDNA virus sp. 2591644 Viruses Viruses 335 2.159999999999999e-87   NTclustered gi|1707910805|gb|MK892832.1| 2591644 g23897 i0 94.47 1.01503759398496 217 12 100 0 50 266 1215 999 MAG: Prokaryotic dsDNA virus sp. isolate Tp1_111_DCM_112609_1, complete genome blastn 270 335 1 Viruses               Prokaryotic dsDNA virus sp.
3060026 3060026 PRJNA541476_P_NODE_38483_length_243_cov_0.917647_g38277_i0 PRJNA541476 38483 243 0.917647 2.22988221 Caudoviricetes sp. 2832643 Viruses Viruses 355 1.49e-93   NTclustered gi|2914933639|gb|OR221620.1| 2832643 g38277 i0 93.004 2 243 17 100 0 1 243 35302 35544 MAG: Caudoviricetes sp. isolate MSP1439 genomic sequence blastn 486 355 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5612180 5612180 PRJNA541476_P_NODE_11305_length_344_cov_1.143911_g11099_i0 PRJNA541476 11305 344 1.143911 3.93505384 Prokaryotic dsDNA virus sp. 2591644 Viruses Viruses 412 1.3e-110   NTclustered gi|1707910805|gb|MK892832.1| 2591644 g11099 i0 88.439 1.00581395348837 346 35 99 5 1 342 38603 38259 MAG: Prokaryotic dsDNA virus sp. isolate Tp1_111_DCM_112609_1, complete genome blastn 346 412 1 Viruses               Prokaryotic dsDNA virus sp.
5612273 5612273 PRJNA541476_P_NODE_15405_length_307_cov_1.085470_g15199_i0 PRJNA541476 15405 307 1.08547 3.3323929 uncultured virus 340016 Viruses Viruses 181 1.77e-53   NR CAH6419174.1 340016 g15199 i0 86.1 0.986970684039088 101 14 98.7 0 305 3 70 170 CAH6419174.1 S-adenosylmethionine synthetase [uncultured virus] diamond 303 181 1 Viruses               uncultured virus
8162083 8162083 PRJNA541476_P_NODE_7127_length_423_cov_1.802857_g6923_i0 PRJNA541476 7127 423 1.802857 7.62608511 Qianjiang noda-like virus 113 3348483 Viruses Viruses 710 0   NTclustered gi|2806500229|gb|PQ053975.1| 3348483 g6923 i0 96.927 2.34042553191489 423 13 100 0 1 423 2189 2611 MAG: Qianjiang noda-like virus 113 isolate QJ3TS2157 genomic sequence blastn 990 710 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   Qianjiang noda-like virus 113
9436663 9436663 PRJNA541476_P_NODE_11568_length_341_cov_1.141791_g11362_i0 PRJNA541476 11568 341 1.141791 3.89350731 brine shrimp yue-like virus 7 2900459 Viruses Viruses 608 1.5199999999999993e-169   NTclustered gi|2209095290|gb|OL472849.1| 2900459 g11362 i0 98.827 4.95601173020528 341 4 100 0 1 341 1111 1451 MAG: Brine shrimp yue-like virus 7 isolate GSL/94 segment 2 hypothetical protein gene, complete cds blastn 1690 608 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
9436866 9436866 PRJNA541476_P_NODE_21528_length_276_cov_1.078818_g21322_i0 PRJNA541476 21528 276 1.078818 2.97753768 Streptococcus phage MissC 2911156 Viruses Viruses 505 1.62e-138   NTclustered gi|2179942405|gb|OL774872.1| 2911156 g21322 i0 99.638 28.6992753623188 276 1 100 0 1 276 11261 11536 Streptococcus phage MissC, complete genome blastn 7921 505 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Streptococcus phage MissC
10712980 10712980 PRJNA541476_P_NODE_30909_length_250_cov_0.875706_g30703_i0 PRJNA541476 30909 250 0.875706 2.189265 Caudoviricetes sp. 2832643 Viruses Viruses 335 2.0099999999999996e-87   NTclustered gi|2914786054|gb|OR222556.1| 2832643 g30703 i0 90.873 3.808 252 20 99 2 2 250 82715 82464 MAG: Caudoviricetes sp. isolate MSP0376 genomic sequence blastn 952 335 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10713398 10713398 PRJNA541476_P_NODE_7449_length_415_cov_1.178363_g7245_i0 PRJNA541476 7449 415 1.178363 4.89020645 Prokaryotic dsDNA virus sp. 2591644 Viruses Viruses 52.8 0.04   NTclustered gi|1707897855|gb|MK892636.1| 2591644 g7245 i0 100 0.0674698795180723 28 0 7 0 68 95 27022 26995 MAG: Prokaryotic dsDNA virus sp. isolate Unbinned_5336_contig-100_1, complete genome blastn 28 52.8 1 Viruses               Prokaryotic dsDNA virus sp.
11988006 11988006 PRJNA541476_P_NODE_5450_length_486_cov_2.029056_g5248_i0 PRJNA541476 5450 486 2.029056 9.86121216 Qianjiang noda-like virus 113 3348483 Viruses Viruses 854 0   NTclustered gi|2806500229|gb|PQ053975.1| 3348483 g5248 i0 98.354 1.80864197530864 486 8 100 0 1 486 514 29 MAG: Qianjiang noda-like virus 113 isolate QJ3TS2157 genomic sequence blastn 879 854 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   Qianjiang noda-like virus 113
13262456 13262456 PRJNA541476_P_NODE_22351_length_272_cov_2.025126_g22145_i0 PRJNA541476 22351 272 2.025126 5.50834272 Bermuda grass latent virus 1930269 Viruses Viruses 470 5.81e-128   NTclustered gi|1124891108|gb|KX758441.1| 1930269 g22145 i0 97.794 2.99632352941176 272 6 100 0 1 272 14 285 Bermuda grass latent virus isolate BGLV, complete genome blastn 815 470 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Panicovirus Bermuda grass latent virus
15812037 15812037 PRJNA541476_P_NODE_5553_length_481_cov_2.968137_g5351_i0 PRJNA541476 5553 481 2.968137 14.27673897 Shenzhen dicistro-like virus 2789378 Viruses Viruses 817 0   NTclustered gi|1940198121|gb|MT757492.1| 2789378 g5351 i0 97.297 2.77754677754678 481 13 100 0 1 481 8600 8120 Shenzhen dicistro-like virus strain CHNdp-2 polyprotein gene, complete cds blastn 1336 817 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus
16421320 16421320 PRJNA541476_P_NODE_20573_length_280_cov_1.106280_g20367_i0 PRJNA541476 20573 280 1.10628 3.097584 Tobamovirus 12234 Viruses Viruses 518 2.12e-142   NTclustered gi|2647550519|gb|OR843964.1| 12242 g20367 i0 100 100 280 0 100 0 1 280 1980 2259 Tobacco mosaic virus strain MR644-18E/3430 nonstructural polyprotein p183, nonstructural polyprotein p126, and movement protein genes, partial cds blastn 28000 518 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
18360819 18360819 PRJNA541476_P_NODE_7735_length_406_cov_3.426426_g7531_i0 PRJNA541476 7735 406 3.426426 13.91128956 Shenzhen dicistro-like virus 2789378 Viruses Viruses 708 0   NTclustered gi|1940198121|gb|MT757492.1| 2789378 g7531 i0 98.039 2.90147783251232 408 6 100 2 1 406 8570 8977 Shenzhen dicistro-like virus strain CHNdp-2 polyprotein gene, complete cds blastn 1178 708 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus
19635413 19635413 PRJNA541476_P_NODE_9036_length_377_cov_2.483553_g8830_i0 PRJNA541476 9036 377 2.483553 9.36299481 Bermuda grass latent virus 1930269 Viruses Viruses 647 0   NTclustered gi|2221822461|gb|MZ671022.1| 1930269 g8830 i0 97.861 2.97612732095491 374 8 99 0 4 377 2971 2598 Bermuda grass latent virus isolate 5657, complete genome blastn 1122 647 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Panicovirus Bermuda grass latent virus
24735182 24735182 PRJNA541476_P_NODE_4840_length_518_cov_1.885393_g4640_i0 PRJNA541476 4840 518 1.885393 9.76633574 Caudoviricetes sp. 2832643 Viruses Viruses 62.1 8.43e-5   NTclustered gi|2059632675|tpg|BK028438.1| 2832643 g4640 i0 92.857 0.413127413127413 42 3 8 0 147 188 42472 42431 MAG TPA_asm: Caudoviricetes sp. isolate ctawJ4, partial genome blastn 214 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
26666098 26666098 PRJNA541476_P_NODE_4761_length_522_cov_1.875278_g4561_i0 PRJNA541476 4761 522 1.875278 9.78895116 rice-associated noda-like virus 2 2966239 Viruses Viruses 47.8 0.00844   NR UTU02166.1 2966239 g4561 i0 32.4 0.620689655172414 108 57 56.9 4 471 175 278 378 UTU02166.1 capsid protein [rice-associated noda-like virus 2] diamond 324 47.8 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   rice-associated noda-like virus 2
26666101 26666101 PRJNA541476_P_NODE_6421_length_445_cov_3.814516_g6218_i0 PRJNA541476 6421 445 3.814516 16.9745962 Sylvanvirus sp. 2487774 Viruses Viruses 199 7.89e-63   NR AYV86982.1 2487774 g6218 i0 75.9 2.73707865168539 133 30 89.7 1 401 3 6 136 AYV86982.1 MAG: nucleic acid-binding protein [Sylvanvirus sp.] diamond 1218 199 1 Viruses               Sylvanvirus sp.
26824855 26824855 PRJNA541476_P_NODE_11141_length_346_cov_1.058608_g10935_i0 PRJNA541476 11141 346 1.058608 3.66278368 Terrestrivirus sp. 2487775 Viruses Viruses 71.6 6.33e-12   NR AYV75160.1 2487775 g10935 i0 38.2 0.771676300578035 89 48 73.7 2 291 37 91 176 AYV75160.1 MAG: hypothetical protein Terrestrivirus1_34 [Terrestrivirus sp.] diamond 267 71.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Terrestrivirus sp.
27235906 27235906 PRJNA541476_P_NODE_7923_length_401_cov_3.411585_g7719_i0 PRJNA541476 7923 401 3.411585 13.68045585 Micromonas pusilla virus 12T 755272 Viruses Viruses 122 2.2e-29   NR YP_007676312.1 755272 g7719 i0 51.5 2.96259351620948 132 55 98.8 1 3 398 203 325 YP_007676312.1 heat shock protein 70 [Micromonas pusilla virus 12T] diamond 1188 122 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Micromonas pusilla virus 12T
27394136 27394136 PRJNA541476_P_NODE_7783_length_405_cov_2.548193_g7579_i0 PRJNA541476 7783 405 2.548193 10.32018165 rice-associated noda-like virus 2 2966239 Viruses Viruses 99 1.91e-21   NR UTU02166.1 2966239 g7579 i0 60.2 0.614814814814815 83 33 61.5 0 249 1 39 121 UTU02166.1 capsid protein [rice-associated noda-like virus 2] diamond 249 99 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   rice-associated noda-like virus 2
27835869 27835869 PRJNA541476_P_NODE_6584_length_440_cov_2.784741_g6380_i0 PRJNA541476 6584 440 2.784741 12.2528604 Solumvirus sp. 2487773 Viruses Viruses 181 8.339999999999997e-55   NR AYV86227.1 2487773 g6380 i0 66.4 0.913636363636364 134 40 88 1 2 388 54 187 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 402 181 1 Viruses Pithoviruses             Solumvirus sp.
28751601 28751601 PRJNA541476_P_NODE_20727_length_279_cov_1.495146_g20521_i0 PRJNA541476 20727 279 1.495146 4.17145734 Faunusvirus sp. 2487766 Viruses Viruses 63.9 2.03e-9   NR AYV79658.1 2487766 g20521 i0 51.4 0.752688172043011 70 30 72 3 77 277 476 544 AYV79658.1 MAG: putative helicase/exonuclease [Faunusvirus sp.] diamond 210 63.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Faunusvirus sp.
30551653 30551653 PRJNA541476_P_NODE_21073_length_278_cov_0.892683_g20867_i0 PRJNA541476 21073 278 0.892683 2.48165874 Tupanvirus deep ocean 2126984 Viruses Viruses 89.7 5.1e-19   NR YP_010781083.1 2126984 g20867 i0 53.2 1.70503597122302 79 36 85.3 1 238 2 124 201 YP_010781083.1 hypothetical protein QJ856_gp0282 [Tupanvirus deep ocean] diamond 474 89.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus altamarinense
30994214 30994214 PRJNA541476_P_NODE_4194_length_560_cov_2.316222_g3998_i0 PRJNA541476 4194 560 2.316222 12.9708432 Edafosvirus sp. 2487765 Viruses Viruses 55.1 3.85e-5   NR AYV78965.1 2487765 g3998 i0 60.5 0.203571428571429 38 15 20.4 0 268 381 203 240 AYV78965.1 MAG: DEAD/SNF2-like helicase, partial [Edafosvirus sp.] diamond 114 55.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.
31088906 31088906 PRJNA541476_P_NODE_41615_length_230_cov_2.063694_g41409_i0 PRJNA541476 41615 230 2.063694 4.7464962 Yasminevirus sp. GU-2 3060817 Viruses Viruses 73.2 3.64e-13   NR VBB18459.1 2420051 g41409 i0 48.6 0.939130434782609 72 37 93.9 0 14 229 183 254 VBB18459.1 class I SAM-dependent methyltransferase [Yasminevirus sp. GU-2018] diamond 216 73.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Yasminevirus Yasminevirus saudimassiliense
32227747 32227747 PRJNA541476_P_NODE_12978_length_326_cov_1.525692_g12772_i0 PRJNA541476 12978 326 1.525692 4.97375592 Sylvanvirus sp. 2487774 Viruses Viruses 68.2 9.34e-11   NR AYV86437.1 2487774 g12772 i0 46.3 0.616564417177914 67 36 61.7 0 277 77 234 300 AYV86437.1 MAG: hypothetical protein Sylvanvirus1_33 [Sylvanvirus sp.] diamond 201 68.2 1 Viruses               Sylvanvirus sp.
32385799 32385799 PRJNA541476_P_NODE_11679_length_339_cov_2.966165_g11473_i0 PRJNA541476 11679 339 2.966165 10.05529935 Terrestrivirus sp. 2487775 Viruses Viruses 48.5 0.00104   NR AYV76628.1 2487775 g11473 i0 38.8 0.752212389380531 85 39 70.8 3 45 284 215 291 AYV76628.1 MAG: hypothetical protein Terrestrivirus10_12 [Terrestrivirus sp.] diamond 255 48.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Terrestrivirus sp.
32417554 32417554 PRJNA541476_P_NODE_5619_length_478_cov_2.293827_g5417_i0 PRJNA541476 5619 478 2.293827 10.96449306 Fadolivirus algeromassiliense 3060017 Viruses Viruses 77.8 2.95e-13   NR YP_010803800.1 3060017 g5417 i0 58.6 0.728033472803347 58 24 36.4 0 237 64 1048 1105 YP_010803800.1 helicase/uvrB [Fadolivirus algeromassiliense] diamond 348 77.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
32858943 32858943 PRJNA541476_P_NODE_27740_length_254_cov_1.425414_g27534_i0 PRJNA541476 27740 254 1.425414 3.62055156 rice-associated noda-like virus 2 2966239 Viruses Viruses 90.1 5.16e-19   NR UTU02166.1 2966239 g27534 i0 61.3 0.885826771653543 75 28 87.4 1 254 33 189 263 UTU02166.1 capsid protein [rice-associated noda-like virus 2] diamond 225 90.1 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   rice-associated noda-like virus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;