contig_metadata
8 rows where bioproject = "PRJNA541476" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3059479 | 3059479 | PRJNA541476_P_NODE_2103_length_814_cov_1.495277_g1929_i0 | PRJNA541476 | 2103 | 814 | 1.495277 | 12.17155478 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 145 | 1.31e-29 | NTclustered | gi|2649718696|emb|OZ001226.1| | 2202144 | g1929 | i0 | 81.714 | 21.0036855036855 | 175 | 31 | 21 | 1 | 387 | 560 | 74373 | 74547 | MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19 | blastn | 17097 | 145 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 20910852 | 20910852 | PRJNA541476_P_NODE_30457_length_250_cov_1.491525_g30251_i0 | PRJNA541476 | 30457 | 250 | 1.491525 | 3.7288125 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 93.5 | 1.33e-14 | NTclustered | gi|2649718696|emb|OZ001226.1| | 2202144 | g30251 | i0 | 87.5 | 5.288 | 80 | 10 | 32 | 0 | 164 | 243 | 74373 | 74452 | MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19 | blastn | 1322 | 93.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 27678396 | 27678396 | PRJNA541476_P_NODE_13864_length_318_cov_1.730612_g13658_i0 | PRJNA541476 | 13864 | 318 | 1.730612 | 5.50334616 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 52.4 | 2.66e-5 | NR | NBK25468.1 | 2053615 | g13658 | i0 | 29.1 | 0.971698113207547 | 103 | 69 | 97.2 | 1 | 2 | 310 | 80 | 178 | NBK25468.1 hypothetical protein [Spirochaetia bacterium] | diamond | 309 | 52.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 29319898 | 29319898 | PRJNA541476_P_NODE_24249_length_265_cov_3.770833_g24043_i0 | PRJNA541476 | 24249 | 265 | 3.770833 | 9.99270745 | Treponema sp. J25 | 2094121 | Bacteria | Bacteria | 68.9 | 9.47e-12 | NR | WP_132782510.1 | 2094121 | g24043 | i0 | 66.7 | 4.39245283018868 | 45 | 15 | 50.9 | 0 | 263 | 129 | 190 | 234 | WP_132782510.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Treponema sp. J25] | diamond | 1164 | 68.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. J25 | ||
| 30077709 | 30077709 | PRJNA541476_P_NODE_14552_length_313_cov_1.200000_g14346_i0 | PRJNA541476 | 14552 | 313 | 1.2 | 3.756 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 65.9 | 3.63e-10 | NR | HTH14570.1 | 2053615 | g14346 | i0 | 37.5 | 0.996805111821086 | 104 | 41 | 99.7 | 2 | 2 | 313 | 113 | 192 | HTH14570.1 arylamine N-acetyltransferase [Spirochaetia bacterium] | diamond | 312 | 65.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 30741355 | 30741355 | PRJNA541476_P_NODE_7874_length_403_cov_1.709091_g7670_i0 | PRJNA541476 | 7874 | 403 | 1.709091 | 6.88763673 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 93.2 | 2.09e-19 | NR | MCB1173775.1 | 2026757 | g7670 | i0 | 41.2 | 1.5409429280397 | 131 | 53 | 95.3 | 3 | 16 | 399 | 231 | 340 | MCB1173775.1 catalase family protein [Leptospiraceae bacterium] | diamond | 621 | 93.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 30867685 | 30867685 | PRJNA541476_P_NODE_33414_length_247_cov_2.741379_g33208_i0 | PRJNA541476 | 33414 | 247 | 2.741379 | 6.77120613 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 89.4 | 8.33e-21 | NR | MEI8094677.1 | 2026792 | g33208 | i0 | 62.9 | 0.850202429149798 | 70 | 25 | 85 | 1 | 242 | 33 | 52 | 120 | MEI8094677.1 RidA family protein [Spirochaetales bacterium] | diamond | 210 | 89.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 32259546 | 32259546 | PRJNA541476_P_NODE_13218_length_324_cov_1.438247_g13012_i0 | PRJNA541476 | 13218 | 324 | 1.438247 | 4.65992028 | Candidatus Avitreponema avistercoris | 2840705 | Bacteria | Bacteria | 47 | 0.00163 | NR | MBO8451066.1 | 2840705 | g13012 | i0 | 41.4 | 0.537037037037037 | 58 | 34 | 53.7 | 0 | 109 | 282 | 95 | 152 | MBO8451066.1 tetratricopeptide repeat protein [Candidatus Avitreponema avistercoris] | diamond | 174 | 47 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Candidatus Avitreponema | Candidatus Avitreponema avistercoris |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;