RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA541476" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA541476 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28814502 28814502 PRJNA541476_P_NODE_8368_length_391_cov_1.845912_g8164_i0 PRJNA541476 8368 391 1.845912 7.21751592 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 227 3.62e-71   NR MBL7998574.1 2447898 g8164 i0 80 1.99488491048593 130 26 99.7 0 391 2 220 349 MBL7998574.1 DUF1016 family protein [Candidatus Kapaibacterium sp.] diamond 780 227 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29983102 29983102 PRJNA541476_P_NODE_22751_length_271_cov_1.292929_g22545_i0 PRJNA541476 22751 271 1.292929 3.50383759 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 45.1 0.00775   NR MBP7214915.1 2447898 g22545 i0 45.2 0.686346863468635 62 24 68.6 2 187 2 2 53 MBP7214915.1 S-methyl-5-thioribose-1-phosphate isomerase [Candidatus Kapaibacterium sp.] diamond 186 45.1 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;