RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA541476", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA541476 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11987181 11987181 PRJNA541476_P_NODE_14610_length_312_cov_1.907950_g14404_i0 PRJNA541476 14610 312 1.90795 5.952804 Opisthorchis viverrini 6198 Platyhelminthes Platyhelminthes 58.4 6.27e-4   NTclustered gi|684399524|ref|XM_009174269.1| 6198 g14404 i0 97.059 0.201923076923077 34 1 11 0 139 172 1160 1127 Opisthorchis viverrini hypothetical protein partial mRNA blastn 63 58.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
15146604 15146604 PRJNA541476_P_NODE_2192_length_799_cov_12.280992_g2016_i0 PRJNA541476 2192 799 12.280992 98.12512608 Fasciolopsis buskii 27845 Platyhelminthes Platyhelminthes 243 1.41e-77   NR KAA0196388.1 27845 g2016 i0 68.2 2.60200250312891 173 55 65 0 50 568 4 176 KAA0196388.1 Ribosomal protein L11 [Fasciolopsis buskii] diamond 2079 243 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciolopsis Fasciolopsis buskii
17085913 17085913 PRJNA541476_P_NODE_13434_length_322_cov_1.453815_g13228_i0 PRJNA541476 13434 322 1.453815 4.6812843 Hymenolepis microstoma 85433 Platyhelminthes Platyhelminthes 92.8 6.370000000000001e-21   NR CDS30182.1 85433 g13228 i0 62.8 10.1273291925466 78 27 72.7 1 2 235 120 195 CDS30182.1 60S ribosomal protein L10a [Hymenolepis microstoma] diamond 3261 92.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
20910768 20910768 PRJNA541476_P_NODE_27577_length_254_cov_2.408840_g27371_i0 PRJNA541476 27577 254 2.40884 6.1184536 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 52.8 0.023   NTclustered gi|2318771980|ref|XM_051208396.1| 6185 g27371 i0 100 0.110236220472441 28 0 11 0 62 89 2391 2364 Schistosoma haematobium uncharacterized protein (MS3_00000747), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
21520611 21520611 PRJNA541476_P_NODE_5097_length_504_cov_2.582367_g4896_i0 PRJNA541476 5097 504 2.582367 13.01512968 Metazoa 33208 Platyhelminthes Platyhelminthes 931 0   NTclustered gi|60687563|gb|AY914894.1| 6182 g4896 i0 100 100 504 0 100 0 1 504 556 53 Schistosoma japonicum unknown mRNA blastn 50400 931 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
29414578 29414578 PRJNA541476_P_NODE_19529_length_284_cov_1.459716_g19323_i0 PRJNA541476 19529 284 1.459716 4.14559344 Heterobilharzia americana 39320 Platyhelminthes Platyhelminthes 48.9 4.01e-4   NR CAH8541105.1 39320 g19323 i0 59.5 1.17253521126761 37 15 39.1 0 124 14 24 60 CAH8541105.1 unnamed protein product [Heterobilharzia americana] diamond 333 48.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Heterobilharzia Heterobilharzia americana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;