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contig_metadata

20 rows where bioproject = "PRJNA541476", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 20 ✖

tax_kingdom 1

  • Metazoa · 20 ✖

tax_clade 1

bioproject 1

  • PRJNA541476 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1118445 1118445 PRJNA541476_P_NODE_36821_length_244_cov_2.087719_g36615_i0 PRJNA541476 36821 244 2.087719 5.09403436 Diploscapter pachys 2018661 Nematoda Nematoda 118 8.14e-29   NR PAV64766.1 2018661 g36615 i0 72.8 3.98360655737705 81 22 99.6 0 243 1 688 768 PAV64766.1 hypothetical protein WR25_26254 [Diploscapter pachys] diamond 972 118 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
1118462 1118462 PRJNA541476_P_NODE_7841_length_404_cov_1.861027_g7637_i0 PRJNA541476 7841 404 1.861027 7.51854908 Bursaphelenchus cocophilus 269710 Nematoda Nematoda 189 4.42e-58   NR AAS90523.1 269710 g7637 i0 72 10.7524752475248 132 37 98 0 3 398 70 201 AAS90523.1 cytochrome oxidase subunit I, partial [Bursaphelenchus cocophilus] diamond 4344 189 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus cocophilus
8162079 8162079 PRJNA541476_P_NODE_687_length_1357_cov_12.161215_g588_i0 PRJNA541476 687 1357 12.161215 165.02768755 Meloidogyne graminicola 189291 Nematoda Nematoda 113 2.84e-24   NR AVZ46778.1 189291 g588 i0 51.5 0.287398673544584 130 62 28.5 1 1027 641 117 246 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 390 113 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
9437561 9437561 PRJNA541476_P_NODE_8048_length_398_cov_3.350769_g7844_i0 PRJNA541476 8048 398 3.350769 13.33606062 Oigolaimella attenuata 669116 Nematoda Nematoda 303 9.53e-78   NTclustered gi|256709322|gb|GQ422336.1| 669116 g7844 i0 83.962 46.8391959798995 318 49 80 2 79 395 42 358 Oigolaimella attenuata large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds blastn 18642 303 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteridae Oigolaimella Oigolaimella attenuata
14538079 14538079 PRJNA541476_P_NODE_8952_length_379_cov_1.869281_g8746_i0 PRJNA541476 8952 379 1.869281 7.08457499 root 1 Root_unresolved Root_unresolved 78.6 5.26e-14   NR KAI6222442.1 1052528 g8746 i0 47.6 4.27440633245383 105 49 79.2 3 355 56 20 123 KAI6222442.1 ATP synthase subunit gamma, mitochondrial [Aphelenchoides fujianensis] diamond 1620 79.3 0.991172761664565 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides fujianensis
22795762 22795762 PRJNA541476_P_NODE_558_length_1479_cov_12.586060_g472_i0 PRJNA541476 558 1479 12.58606 186.1478274 Bursaphelenchus okinawaensis 465554 Nematoda Nematoda 148 1.9e-37   NR CAD5214079.1 465554 g472 i0 40.3 1.00202839756592 248 137 49.1 6 1232 507 7 249 CAD5214079.1 unnamed protein product [Bursaphelenchus okinawaensis] diamond 1482 148 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus okinawaensis
26744172 26744172 PRJNA541476_P_NODE_41161_length_234_cov_3.229814_g40955_i0 PRJNA541476 41161 234 3.229814 7.55776476 Metazoa 33208 Nematoda Nematoda 90.9 3.84e-19   NR XP_003378563.1 6334 g40955 i0 58.3 9.43589743589744 72 30 92.3 0 216 1 605 676 XP_003378563.1 methylmalonyl-CoA mutase [Trichinella spiralis] diamond 2208 91.3 0.995618838992333 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
27109273 27109273 PRJNA541476_P_NODE_10702_length_351_cov_1.298561_g10496_i0 PRJNA541476 10702 351 1.298561 4.55794911 Heterodera trifolii 157864 Nematoda Nematoda 51.6 9.67e-5   NR KAL3088297.1 157864 g10496 i0 37.3 1.34188034188034 83 39 65 4 270 43 397 473 KAL3088297.1 hypothetical protein niasHT_023857 [Heterodera trifolii] diamond 471 51.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
27330844 27330844 PRJNA541476_P_NODE_16643_length_299_cov_1.362832_g16437_i0 PRJNA541476 16643 299 1.362832 4.07486768 Caenorhabditis angaria 860376 Nematoda Nematoda 101 5.5e-23   NR CAI5448275.1 860376 g16437 i0 68.9 4.39464882943144 74 23 74.2 0 76 297 5 78 CAI5448275.1 unnamed protein product [Caenorhabditis angaria] diamond 1314 101 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis angaria
28309675 28309675 PRJNA541476_P_NODE_746_length_1309_cov_14.932848_g642_i0 PRJNA541476 746 1309 14.932848 195.47098032 Meloidogyne graminicola 189291 Nematoda Nematoda 61.6 1.71e-6   NR AVZ46778.1 189291 g642 i0 33.1 0.297937356760886 130 87 29.8 0 877 488 117 246 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 390 61.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
28846168 28846168 PRJNA541476_P_NODE_20588_length_280_cov_1.009662_g20382_i0 PRJNA541476 20588 280 1.009662 2.8270536 Soboliphyme baturini 241478 Nematoda Nematoda 144 2.56e-39   NR VDP15114.1 241478 g20382 i0 71.7 4.92857142857143 92 26 98.6 0 3 278 42 133 VDP15114.1 unnamed protein product [Soboliphyme baturini] diamond 1380 144 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini
28956168 28956168 PRJNA541476_P_NODE_6968_length_428_cov_1.709859_g6764_i0 PRJNA541476 6968 428 1.709859 7.31819652 Metazoa 33208 Nematoda Nematoda 151 7.899999999999999e-43   NR KAI6182696.1 293665 g6764 i0 58.1 2.64953271028037 129 54 90.4 0 40 426 11 139 KAI6182696.1 Ribosomal protein L1 domain containing protein [Aphelenchoides bicaudatus] diamond 1134 152 0.993421052631579 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides bicaudatus
29288262 29288262 PRJNA541476_P_NODE_21029_length_278_cov_1.170732_g20823_i0 PRJNA541476 21029 278 1.170732 3.25463496 Heterodera trifolii 157864 Nematoda Nematoda 98.6 4.570000000000001e-22   NR KAL3114911.1 157864 g20823 i0 55.4 6.42086330935252 83 36 88.5 1 32 277 12 94 KAL3114911.1 hypothetical protein niasHT_011347 [Heterodera trifolii] diamond 1785 98.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
29414571 29414571 PRJNA541476_P_NODE_12709_length_328_cov_2.980392_g12503_i0 PRJNA541476 12709 328 2.980392 9.77568576 Thelazia callipaeda 103827 Nematoda Nematoda 61.2 2.76e-8   NR VDN03213.1 103827 g12503 i0 59 2.65243902439024 39 16 35.7 0 2 118 295 333 VDN03213.1 unnamed protein product [Thelazia callipaeda] diamond 870 61.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Thelaziidae Thelazia Thelazia callipaeda
29524334 29524334 PRJNA541476_P_NODE_17930_length_292_cov_0.986301_g17724_i0 PRJNA541476 17930 292 0.986301 2.87999892 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.5 1.25e-11   NR XP_024498467.1 34506 g17724 i0 41.1 10.5821917808219 90 48 92.5 2 289 20 1257 1341 XP_024498467.1 A disintegrin and metalloproteinase with thrombospondin motifs 9 [Strongyloides ratti] diamond 3090 70.9 0.994358251057828 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
30282705 30282705 PRJNA541476_P_NODE_29412_length_251_cov_1.730337_g29206_i0 PRJNA541476 29412 251 1.730337 4.34314587 Rhabditidae 6243 Nematoda Nematoda 48.9 7.87e-5   NR NP_001379423.1 6239 g29206 i0 55.3 3.77689243027888 38 17 45.4 0 87 200 28 65 NP_001379423.1 ShKT domain-containing protein [Caenorhabditis elegans] diamond 948 48.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
30850977 30850977 PRJNA541476_P_NODE_12674_length_329_cov_1.199219_g12468_i0 PRJNA541476 12674 329 1.199219 3.94543051 Metazoa 33208 Nematoda Nematoda 48.5 8.48e-4   NR XP_024507644.1 34506 g12468 i0 61.8 5.49848024316109 34 13 31 0 1 102 304 337 XP_024507644.1 Probable tRNA N6-adenosine threonylcarbamoyltransferase [Strongyloides ratti] diamond 1809 48.9 0.991820040899796 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
32006162 32006162 PRJNA541476_P_NODE_3138_length_659_cov_2.539249_g2946_i0 PRJNA541476 3138 659 2.539249 16.73365091 Mesorhabditis spiculigera 96644 Nematoda Nematoda 47 0.0183   NR CAJ0577101.1 96644 g2946 i0 28.7 1.28831562974203 129 77 56.9 7 274 648 38 155 CAJ0577101.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 849 47 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
32638284 32638284 PRJNA541476_P_NODE_29280_length_251_cov_3.011236_g29074_i0 PRJNA541476 29280 251 3.011236 7.55820236 Toxocara canis 6265 Nematoda Nematoda 63.2 1.14e-9   NR VDM27774.1 6265 g29074 i0 40.4 3.1195219123506 57 34 68.1 0 171 1 28 84 VDM27774.1 unnamed protein product [Toxocara canis] diamond 783 63.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
32733193 32733193 PRJNA541476_P_NODE_3820_length_591_cov_3.007722_g3626_i0 PRJNA541476 3820 591 3.007722 17.77563702 Mesorhabditis belari 2138241 Nematoda Nematoda 60.1 5.83e-7   NR CAJ0933546.1 2138241 g3626 i0 34.1 0.416243654822335 82 36 40.1 2 6 242 194 260 CAJ0933546.1 unnamed protein product, partial [Mesorhabditis belari] diamond 246 60.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;