RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA541476", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA541476 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15811534 15811534 PRJNA541476_P_NODE_26413_length_258_cov_1.610811_g26207_i0 PRJNA541476 26413 258 1.610811 4.15589238 Opisthokonta 33154 Fungi Fungi 112 7.47e-30   NR KAJ3373363.1 64504 g26207 i0 74.7 2.6046511627907 75 19 87.2 0 256 32 55 129 KAJ3373363.1 60S ribosomal protein L32 [Allomyces arbusculus] diamond 672 112 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
18360468 18360468 PRJNA541476_P_NODE_3295_length_642_cov_1.070299_g3103_i0 PRJNA541476 3295 642 1.070299 6.87131958 Paraphysoderma sedebokerense 1500003 Fungi Fungi 189 9e-53   NR KAI9144775.1 1500003 g3103 i0 48.8 5.98598130841121 213 106 99.5 3 640 2 113 322 KAI9144775.1 P-loop containing nucleoside triphosphate hydrolase protein [Paraphysoderma sedebokerense] diamond 3843 189 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
27457287 27457287 PRJNA541476_P_NODE_31583_length_249_cov_1.306818_g31377_i0 PRJNA541476 31583 249 1.306818 3.25397682 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 84 1.22e-16   NR KAI9175515.1 1313167 g31377 i0 60.9 1.5421686746988 64 25 77.1 0 57 248 169 232 KAI9175515.1 ATP-dependent RNA helicase dbp2 [Blastocladiella emersonii ATCC 22665] diamond 384 84 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
27535152 27535152 PRJNA541476_P_NODE_34943_length_246_cov_0.901734_g34737_i0 PRJNA541476 34943 246 0.901734 2.21826564 root 1 Root_unresolved Root_unresolved 43.1 0.0279   NR KAI9175940.1 1313167 g34737 i0 46.7 1.32926829268293 45 22 54.9 1 200 66 341 383 KAI9175940.1 hypothetical protein H9P43_006304 [Blastocladiella emersonii ATCC 22665] diamond 327 43.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
27741604 27741604 PRJNA541476_P_NODE_9684_length_366_cov_1.665529_g9478_i0 PRJNA541476 9684 366 1.665529 6.09583614 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 132 7.92e-34   NR KNE65010.1 578462 g9478 i0 54.9 3.81967213114754 122 55 100 0 1 366 6 127 KNE65010.1 succinate-CoA ligase, beta subunit [Allomyces macrogynus ATCC 38327] diamond 1398 132 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
28151906 28151906 PRJNA541476_P_NODE_26925_length_256_cov_2.120219_g26719_i0 PRJNA541476 26925 256 2.120219 5.42776064 Blastocladiella britannica 64508 Fungi Fungi 83.2 2.61e-16   NR KAI9223239.1 64508 g26719 i0 58 0.80859375 69 29 80.9 0 49 255 389 457 KAI9223239.1 hypothetical protein BC828DRAFT_376433 [Blastocladiella britannica] diamond 207 83.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
32291298 32291298 PRJNA541476_P_NODE_21299_length_277_cov_1.034314_g21093_i0 PRJNA541476 21299 277 1.034314 2.86504978 Coelomomyces lativittatus 945690 Fungi Fungi 77 9.64e-16   NR KAJ1498615.1 945690 g21093 i0 50.6 2.48014440433213 77 24 82.3 2 228 1 2 65 KAJ1498615.1 Glycerol-3-phosphate dehydrogenase [Coelomomyces lativittatus] diamond 687 77 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;